RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ODF3Q96PU9 254 aa11.96□□□□□ -0.49
TRAF3-204ENST00000539721 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
TRAF3-204ENST00000539721 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 H7BYZ3 331 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 GPX1P07203 203 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 CRISP2P16562 243 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 CRIP1P50238 77 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 ZNF80P51504 273 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-204ENST00000539721 FAM162BQ5T6X4 162 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 STHQ8IWL8 128 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 ZFAND2AQ8N6M9 145 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 WFDC10AQ9H1F0 79 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 C19orf73Q9NVV2 129 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 ANK2Q01484 3957 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 GATCO43716 136 aaKnown RBP11.95□□□□□ -0.5
TRAF3-204ENST00000539721 SH2D1AO60880 128 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 P01737 135 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 OXLD1Q5BKU9 147 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 PRR9Q5T870 116 aa11.95□□□□□ -0.5
TRAF3-204ENST00000539721 A8MTW9 85 aa11.94□□□□□ -0.5
TRAF3-204ENST00000539721 ZNF705GA8MUZ8 300 aaPredicted RBP11.94□□□□□ -0.5
TRAF3-204ENST00000539721 TSPOP30536 169 aa11.94□□□□□ -0.5
TRAF3-204ENST00000539721 AMTNQ6UX39 209 aa11.94□□□□□ -0.5
TRAF3-204ENST00000539721 NOTCH3Q9UM47 2321 aa11.94□□□□□ -0.5
TRAF3-204ENST00000539721 FABP5P3A8MUU1 101 aa11.93□□□□□ -0.5
TRAF3-204ENST00000539721 SPINK13Q1W4C9 94 aa11.93□□□□□ -0.5
TRAF3-204ENST00000539721 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
TRAF3-204ENST00000539721 CBLN2Q8IUK8 224 aa11.93□□□□□ -0.5
TRAF3-204ENST00000539721 TMEM242Q9NWH2 141 aa11.93□□□□□ -0.5
TRAF3-204ENST00000539721 V9GYV3 84 aa11.93□□□□□ -0.5
TRAF3-204ENST00000539721 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 M0R2Z0 102 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 PFN1P07737 140 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 RNASE4P34096 147 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 CDKN1BP46527 198 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 FXYD7P58549 80 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 BTN1A1Q13410 526 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 KIR3DS1Q14943 382 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 RPP21Q9H633 154 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 KLLNB2CW77 178 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 TRPT1Q86TN4 253 aaKnown RBP11.92□□□□□ -0.5
TRAF3-204ENST00000539721 DEFB125Q8N687 156 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 CLUHP3Q96NS8 147 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 SMCO4Q9NRQ5 59 aa11.92□□□□□ -0.5
TRAF3-204ENST00000539721 OR2D3Q8NGH3 330 aa11.91□□□□□ -0.5
TRAF3-204ENST00000539721 CMYA5Q8N3K9 4069 aa11.91□□□□□ -0.5
TRAF3-204ENST00000539721 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
TRAF3-204ENST00000539721 TRAV21A0A0B4J279 112 aa11.9□□□□□ -0.5
TRAF3-204ENST00000539721 CA1P00915 261 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-204ENST00000539721 Q6AWC8 147 aa11.9□□□□□ -0.5
TRAF3-204ENST00000539721 C7orf71A4D174 169 aa11.9□□□□□ -0.51
TRAF3-204ENST00000539721 TMEM189A5PLL7 270 aa11.9□□□□□ -0.51
TRAF3-204ENST00000539721 CXorf65A6NEN9 183 aa11.9□□□□□ -0.51
TRAF3-204ENST00000539721 RPL19P84098 196 aaKnown RBP11.9□□□□□ -0.51
TRAF3-204ENST00000539721 GFI1BQ5VTD9 330 aa11.9□□□□□ -0.51
TRAF3-204ENST00000539721 Q6ZQT7 251 aa11.9□□□□□ -0.51
TRAF3-204ENST00000539721 IL36BQ9NZH7 164 aa11.9□□□□□ -0.51
TRAF3-204ENST00000539721 ORM1P02763 201 aa11.89□□□□□ -0.51
TRAF3-204ENST00000539721 CT83Q5H943 113 aa11.89□□□□□ -0.51
TRAF3-204ENST00000539721 URGCP-MRPS24S4R325 110 aa11.89□□□□□ -0.51
TRAF3-204ENST00000539721 TMSB15BA0A087X1C1 80 aa11.88□□□□□ -0.51
TRAF3-204ENST00000539721 TRAV12-3A0A0B4J271 114 aa11.88□□□□□ -0.51
TRAF3-204ENST00000539721 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
TRAF3-204ENST00000539721 S100PP25815 95 aa11.88□□□□□ -0.51
TRAF3-204ENST00000539721 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
TRAF3-204ENST00000539721 ZMAT5Q9UDW3 170 aaKnown RBP11.88□□□□□ -0.51
TRAF3-204ENST00000539721 A8MWL6 223 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 G3V4G9 280 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 Q8N1Y9 231 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 C11orf21Q9P2W6 132 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
TRAF3-204ENST00000539721 AMBPP02760 352 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 TCL1AP56279 114 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 TSKUQ8WUA8 353 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
TRAF3-204ENST00000539721 XKRY2A2RUG3 117 aa11.86□□□□□ -0.51
TRAF3-204ENST00000539721 GZMBP10144 247 aa11.86□□□□□ -0.51
TRAF3-204ENST00000539721 FAM3BP58499 235 aaPredicted RBP11.86□□□□□ -0.51
TRAF3-204ENST00000539721 RPS20P60866 119 aaKnown RBP11.86□□□□□ -0.51
TRAF3-204ENST00000539721 IGKV3D-20A0A0C4DH25 116 aa11.85□□□□□ -0.51
TRAF3-204ENST00000539721 SMIM27A0A1W2PRY6 76 aa11.85□□□□□ -0.51
TRAF3-204ENST00000539721 ZNF324O75467 553 aaPredicted RBP11.85□□□□□ -0.51
TRAF3-204ENST00000539721 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
TRAF3-204ENST00000539721 SAMD5Q5TGI4 173 aa11.85□□□□□ -0.51
TRAF3-204ENST00000539721 XCL2Q9UBD3 114 aa11.85□□□□□ -0.51
TRAF3-204ENST00000539721 INSP01308 110 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 ELOBQ15370 118 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 MORN3Q6PF18 240 aaPredicted RBP11.84□□□□□ -0.51
TRAF3-204ENST00000539721 NEU1Q99519 415 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 GRIFINA4D1Z8 144 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms