RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 NIT1Q86X76 327 aa15.43■□□□□ 0.06
PACSIN3-211ENST00000539589 AGPAT4-IT1Q9H0P7 198 aa15.43■□□□□ 0.06
PACSIN3-211ENST00000539589 TMEM160Q9NX00 188 aa15.43■□□□□ 0.06
PACSIN3-211ENST00000539589 KRTDAPP60985 99 aa15.43■□□□□ 0.06
PACSIN3-211ENST00000539589 ZNF138P52744 262 aa15.42■□□□□ 0.06
PACSIN3-211ENST00000539589 FAM181BA6NEQ2 426 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 DEFA6Q01524 100 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 PEF1Q9UBV8 284 aaKnown RBP15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 TMEM89A2RUT3 159 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 ORM1P02763 201 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 ZNF493Q6ZR52 646 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 C9orf47Q6ZRZ4 202 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 FER1L6-AS1Q8NA97 138 aa15.41■□□□□ 0.06
PACSIN3-211ENST00000539589 M0R2Z0 102 aa15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 CHCHD1Q96BP2 118 aaKnown RBP15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 DAZ1Q9NQZ3 744 aaKnown RBP15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 PPP1R14DQ9NXH3 145 aa15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 RNF114Q9Y508 228 aa15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 RPLP1P05386 114 aaKnown RBP15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 CTRLP40313 264 aa15.39■□□□□ 0.05
PACSIN3-211ENST00000539589 IGHV7-4-1A0A0J9YVY3 117 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 IGLC6P0CF74 106 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 LINC01559Q495D7 138 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 FAM106AQ4KMX7 169 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 TEX43Q6ZNM6 134 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 Q6ZSV7 163 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 ZNF738Q8NE65 137 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 URB1-AS1Q96HZ7 61 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 HIST1H1AQ02539 215 aaPredicted RBP15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 DMRTA1Q5VZB9 504 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 RHPN1-AS1Q9BWJ2 59 aa15.38■□□□□ 0.05
PACSIN3-211ENST00000539589 NSD1Q96L73 2696 aaPredicted RBP15.37■□□□□ 0.05
PACSIN3-211ENST00000539589 TMEM213A2RRL7 107 aa15.37■□□□□ 0.05
PACSIN3-211ENST00000539589 RPL11P62913 178 aaKnown RBP15.37■□□□□ 0.05
PACSIN3-211ENST00000539589 TM4SF20Q53R12 229 aa15.37■□□□□ 0.05
PACSIN3-211ENST00000539589 GPHB5Q86YW7 130 aa15.37■□□□□ 0.05
PACSIN3-211ENST00000539589 K7EMT4 169 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 LINC00614P0C842 121 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 C3orf79P0CE67 100 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 SRD5A1P18405 259 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 SSTP61278 116 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 MYOZ3Q8TDC0 251 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 C20orf173Q96LM9 149 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 SOCS3O14543 225 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 FOXE3Q13461 319 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 ZNF575Q86XF7 245 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 LENEPQ9Y5L5 61 aa15.36■□□□□ 0.05
PACSIN3-211ENST00000539589 M0QZ24 198 aa15.35■□□□□ 0.05
PACSIN3-211ENST00000539589 ELANEP08246 267 aa15.35■□□□□ 0.05
PACSIN3-211ENST00000539589 TWIST1Q15672 202 aa15.35■□□□□ 0.05
PACSIN3-211ENST00000539589 RNF152Q8N8N0 203 aa15.35■□□□□ 0.05
PACSIN3-211ENST00000539589 Q8N976 141 aa15.35■□□□□ 0.05
PACSIN3-211ENST00000539589 SMPXQ9UHP9 88 aa15.35■□□□□ 0.05
PACSIN3-211ENST00000539589 KIR2DL5BA0A0G2JN68 375 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 KIR2DL5BA0A0G2JPC4 375 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 OVOL1O14753 267 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 FAM104BQ5XKR9 115 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 REC114Q7Z4M0 266 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 KIR2DL5AQ8N109 375 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 LINC00477Q96M19 166 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 BAHCC1Q9P281 2608 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 MUC21A0A0G2JKD1 596 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 MUC21A0A140T8X8 626 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 MUC21Q5SSG8 566 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 OR10J6PQ8NGY7 276 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 C14orf144Q96I85 54 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 VAMP8Q9BV40 100 aa15.34■□□□□ 0.05
PACSIN3-211ENST00000539589 RAB4AP20338 218 aa15.33■□□□□ 0.04
PACSIN3-211ENST00000539589 CNFNQ9BYD5 112 aa15.33■□□□□ 0.04
PACSIN3-211ENST00000539589 UFC1Q9Y3C8 167 aa15.33■□□□□ 0.04
PACSIN3-211ENST00000539589 RNASE1P07998 156 aaKnown RBP15.33■□□□□ 0.04
PACSIN3-211ENST00000539589 FN1P02751 2386 aaKnown RBP15.32■□□□□ 0.04
PACSIN3-211ENST00000539589 TDRG1Q3Y452 100 aa15.32■□□□□ 0.04
PACSIN3-211ENST00000539589 AMN1Q8IY45 258 aa15.32■□□□□ 0.04
PACSIN3-211ENST00000539589 KLHDC1Q8N7A1 406 aa15.32■□□□□ 0.04
PACSIN3-211ENST00000539589 U3KQK5 164 aa15.32■□□□□ 0.04
PACSIN3-211ENST00000539589 SETD2Q9BYW2 2564 aaPredicted RBP15.32■□□□□ 0.04
PACSIN3-211ENST00000539589 IGKV3D-20A0A0C4DH25 116 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 IGHV1-24A0A0C4DH33 117 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 BTF3P20290 206 aaKnown RBP15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 SCGB2A2Q13296 93 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 NDUFAF3Q9BU61 184 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 CSN3P07498 182 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 HILS1P60008 231 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 TCTEX1D4Q5JR98 221 aa15.31■□□□□ 0.04
PACSIN3-211ENST00000539589 INAFM1C9JVW0 142 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 D6R8Y8 96 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 PMCHL1Q16048 86 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 EBLN2Q6P2I7 272 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 C18orf65Q6ZTR6 163 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 ORMDL3Q8N138 153 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 ZNF418Q8TF45 676 aaPredicted RBP15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 C20orf144Q9BQM9 153 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 TMEM191AQ9H0A3 160 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 C11orf21Q9P2W6 132 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 PAM16Q9Y3D7 125 aa15.3■□□□□ 0.04
PACSIN3-211ENST00000539589 IGKV3-7A0A075B6H7 116 aa15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 OR5AL1P0C617 328 aa15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 SAMD13Q5VXD3 122 aa15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 HIST2H2BDQ6DRA6 164 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms