RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 GAGE12JA6NER3 117 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE1Q13065 139 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE4Q13068 117 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE5Q13069 117 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 OCIAD2Q56VL3 154 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 C2orf66Q6UXQ4 117 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 FXYD5Q96DB9 178 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 TNRC18O15417 2968 aaPredicted RBP5.16□□□□□ -1.58
LSAMP-207ENST00000539563 RBAKDNA6NC62 111 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 C20orf78Q9BR46 151 aa5.16□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE12BA1L429 117 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 HOXB4P17483 251 aaPredicted RBP5.15□□□□□ -1.58
LSAMP-207ENST00000539563 RBMY1FQ15415 496 aaKnown RBP5.15□□□□□ -1.58
LSAMP-207ENST00000539563 C10orf91Q5T1B1 145 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 IGF2-ASQ6U949 168 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 HLA-DRB4P13762 266 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 RSPO1Q2MKA7 263 aaPredicted RBP5.15□□□□□ -1.58
LSAMP-207ENST00000539563 UBE2WQ96B02 151 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 SNHG12Q9BXW3 62 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 LENEPQ9Y5L5 61 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 HLA-DRB4X5D2U9 266 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 CACNA1BQ00975 2339 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 SOCS3O14543 225 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 INAFM2P0DMQ5 153 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 NKAPP1Q8N9T2 125 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 ZNF114Q8NC26 417 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 Q8NFD4 153 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 KLK9Q9UKQ9 250 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 PKIGQ9Y2B9 76 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 ABCA1O95477 2261 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 IGHV1-24A0A0C4DH33 117 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 CFHR3Q02985 330 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 EDA2RQ9HAV5 297 aa5.15□□□□□ -1.58
LSAMP-207ENST00000539563 MKI67P46013 3256 aaKnown RBP5.15□□□□□ -1.58
LSAMP-207ENST00000539563 TRAV13-2A0A0B4J235 113 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 IGLC1P0CG04 106 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 HERVK_113P63121 156 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 CYYR1Q96J86 154 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 IGHV3-16A0A0C4DH30 117 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 IGHV2-70P01814 119 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 FOXI2Q6ZQN5 318 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 STPG4Q8N801 248 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 ZNRF2Q8NHG8 242 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 PCDH15Q96QU1 1955 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF503-AS2A6NEH8 195 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 C20orf144Q9BQM9 153 aa5.15□□□□□ -1.59
LSAMP-207ENST00000539563 GAGE7O76087 117 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 GAGE12FP0CL80 117 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 GAGE12GP0CL81 117 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 GAGE12IP0CL82 117 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 WT1-ASQ06250 92 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 MED12LQ86YW9 2145 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 IGKV1-39P01597 117 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 IGKV1D-39P04432 117 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 DUX4L9Q6RFH8 374 aaPredicted RBP5.14□□□□□ -1.59
LSAMP-207ENST00000539563 C11orf52Q96A22 123 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 USF3Q68DE3 2245 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 SDHAF1A6NFY7 115 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 F8VRH5 84 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 IGFL2Q6UWQ7 119 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 RPL32P62910 135 aaKnown RBP5.14□□□□□ -1.59
LSAMP-207ENST00000539563 RHOHQ15669 191 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF726P1Q15940 193 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 ADAMTSL5Q6ZMM2 481 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 C9orf118A6NHY6 69 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 COX8AP10176 69 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 VPREB3Q9UKI3 123 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 PKDREJQ9NTG1 2253 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 KNCNA6PVL3 124 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 LHBP01229 141 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF48Q96MX3 618 aaPredicted RBP5.14□□□□□ -1.59
LSAMP-207ENST00000539563 POLR3KQ9Y2Y1 108 aaPredicted RBP5.14□□□□□ -1.59
LSAMP-207ENST00000539563 MED13Q9UHV7 2174 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 C9JQL5 133 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 CCL24O00175 119 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 MAPK1IP1LQ8NDC0 245 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 ZC2HC1AQ96GY0 325 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 TPSG1Q9NRR2 321 aa5.14□□□□□ -1.59
LSAMP-207ENST00000539563 TRAV12-2A0A075B6T6 113 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 SHISA9B4DS77 424 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 VWC2Q2TAL6 325 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 GAGE2AQ6NT46 116 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 CEND1Q8N111 149 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 SIGLEC8Q9NYZ4 499 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 FAM215AQ9Y5M1 114 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 SHANK1Q9Y566 2161 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 TAL2Q16559 108 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 RNF152Q8N8N0 203 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 GAGE6Q13070 117 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 ZNF491Q8N8L2 437 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 SIVA1O15304 175 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 DOPEY2Q9Y3R5 2298 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 FREM1Q5H8C1 2179 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 FAM120AOSQ5T036 256 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 NAA38Q9BRA0 125 aaKnown RBP5.13□□□□□ -1.59
LSAMP-207ENST00000539563 SMIM2Q9BVW6 85 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 TMEM126AQ9H061 195 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 MMP23AO75900 390 aa5.13□□□□□ -1.59
LSAMP-207ENST00000539563 F8W1H4 67 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms