RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HLA-DRB4X5D2U9 266 aa7.46□□□□□ -1.22
CDH13-204ENST00000539548 AKAP13Q12802 2813 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 IGHV3OR16-8A0A075B7F1 116 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 DPM2O94777 84 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 GOSR1O95249 250 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 FABP2P12104 132 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 FOXC2Q99958 501 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
CDH13-204ENST00000539548 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 CLEC3BP05452 202 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 SMIM17P0DL12 118 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 PPIFP30405 207 aaKnown RBP7.44□□□□□ -1.22
CDH13-204ENST00000539548 SRSF1Q07955 248 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDH13-204ENST00000539548 C15orf32Q32M92 178 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 C11orf71Q6IPW1 123 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 RNF182Q8N6D2 247 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 HIF1ANQ9NWT6 349 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 C11orf21Q9P2W6 132 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 KALRNO60229 2985 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 DMXL2Q8TDJ6 3036 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 IGHV4-4A0A075B6R2 117 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 CLPSL1A2RUU4 121 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 GCSHP23434 173 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 FXYD2P54710 66 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 MRPL53Q96EL3 112 aaKnown RBP7.44□□□□□ -1.22
CDH13-204ENST00000539548 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 TM2D2Q9BX73 214 aa7.44□□□□□ -1.22
CDH13-204ENST00000539548 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 TMEM8BA6NDV4 472 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 LAGE3Q14657 143 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 NRACQ8N912 160 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 MYOZ3Q8TDC0 251 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 TRGV3P03979 118 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 TM4SF20Q53R12 229 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 TMEM78Q5T7P6 136 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 ZC2HC1BQ5TFG8 222 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 C9orf47Q6ZRZ4 202 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 GTSCR1Q86UQ5 136 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 PHLDA1Q8WV24 401 aaPredicted RBP7.43□□□□□ -1.22
CDH13-204ENST00000539548 TTTY13Q9BZ97 58 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 SIRPDQ9H106 197 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 PKD1L2Q7Z442 2459 aa7.43□□□□□ -1.22
CDH13-204ENST00000539548 IGHV7-4-1A0A0J9YVY3 117 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 K7ENP7 123 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 ZFP36P26651 326 aaKnown RBP7.42□□□□□ -1.22
CDH13-204ENST00000539548 CEND1Q8N111 149 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 A0A087WX48 190 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 TRAV40A0A0B4J280 105 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 CCL21O00585 134 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 TAL2Q16559 108 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 AJUBAQ96IF1 538 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 CCDC140Q96MF4 163 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 TMEM160Q9NX00 188 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 MRPL35Q9NZE8 188 aaKnown RBP7.42□□□□□ -1.22
CDH13-204ENST00000539548 SELENOKQ9Y6D0 94 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 U3KQE9 123 aa7.42□□□□□ -1.22
CDH13-204ENST00000539548 ADGRG4Q8IZF6 3080 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 BSNQ9UPA5 3926 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 IGHV3-66A0A0C4DH42 116 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 ATP6V0E1O15342 81 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 RIPPLY3P57055 190 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 ECSCRQ19T08 205 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 CLEC19AQ6UXS0 136 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 METTL26Q96S19 204 aa7.41□□□□□ -1.22
CDH13-204ENST00000539548 PIEZO2Q9H5I5 2752 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 TRBV7-1A0A0A6YYK4 115 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 UBE2E1P51965 193 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 C8orf86Q6ZUL3 223 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 MRAP2Q96G30 205 aa7.4□□□□□ -1.22
CDH13-204ENST00000539548 E9PLD3 99 aa7.4□□□□□ -1.23
CDH13-204ENST00000539548 PLNP26678 52 aa7.4□□□□□ -1.23
CDH13-204ENST00000539548 FOXC1Q12948 553 aa7.4□□□□□ -1.23
CDH13-204ENST00000539548 CDSNQ15517 529 aa7.4□□□□□ -1.23
CDH13-204ENST00000539548 LENEPQ9Y5L5 61 aa7.4□□□□□ -1.23
CDH13-204ENST00000539548 ABCA4P78363 2273 aa7.4□□□□□ -1.23
CDH13-204ENST00000539548 TACC2O95359 2948 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 IGHV3OR16-13A0A075B7E8 117 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 IGHV3-74A0A0B4J1X5 117 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 TRAV12-1A0A0B4J245 112 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 SPANXN1Q5VSR9 72 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 NHP2Q9NX24 153 aaKnown RBP7.39□□□□□ -1.23
CDH13-204ENST00000539548 UFC1Q9Y3C8 167 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 LAMA5O15230 3695 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 G3V318 75 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.39□□□□□ -1.23
CDH13-204ENST00000539548 K7ERJ3 54 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 ADORA2A-AS1P86434 159 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 ATP6V0BQ99437 205 aa7.39□□□□□ -1.23
CDH13-204ENST00000539548 ANKHD1Q8IWZ3 2542 aaKnown RBP7.39□□□□□ -1.23
CDH13-204ENST00000539548 LINC01548A6NM66 108 aa7.38□□□□□ -1.23
CDH13-204ENST00000539548 IGLL5B9A064 214 aa7.38□□□□□ -1.23
CDH13-204ENST00000539548 LINC01619G3V211 115 aa7.38□□□□□ -1.23
CDH13-204ENST00000539548 H7C1H1 209 aa7.38□□□□□ -1.23
CDH13-204ENST00000539548 SMIM2Q9BVW6 85 aa7.38□□□□□ -1.23
CDH13-204ENST00000539548 ATMQ13315 3056 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms