RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ZNF705GA8MUZ8 300 aaPredicted RBP11.45□□□□□ -0.58
VAMP1-207ENST00000539047 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
VAMP1-207ENST00000539047 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
VAMP1-207ENST00000539047 S100PP25815 95 aa11.45□□□□□ -0.58
VAMP1-207ENST00000539047 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
VAMP1-207ENST00000539047 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
VAMP1-207ENST00000539047 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
VAMP1-207ENST00000539047 XKRY2A2RUG3 117 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 H3BMM0 161 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 AMBPP02760 352 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 CD7P09564 240 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 CRISP2P16562 243 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 KCNIP4Q6PIL6 250 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 CLUHP3Q96NS8 147 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 RPP21Q9H633 154 aaKnown RBP11.44□□□□□ -0.58
VAMP1-207ENST00000539047 SMCO4Q9NRQ5 59 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 TMEM242Q9NWH2 141 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 PKD1L1Q8TDX9 2849 aa11.44□□□□□ -0.58
VAMP1-207ENST00000539047 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
VAMP1-207ENST00000539047 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
VAMP1-207ENST00000539047 J3KRW8 73 aa11.43□□□□□ -0.58
VAMP1-207ENST00000539047 PFN1P07737 140 aaKnown RBP11.43□□□□□ -0.58
VAMP1-207ENST00000539047 CDKN1BP46527 198 aa11.43□□□□□ -0.58
VAMP1-207ENST00000539047 RNASE7Q9H1E1 156 aaKnown RBP11.43□□□□□ -0.58
VAMP1-207ENST00000539047 CXorf65A6NEN9 183 aa11.42□□□□□ -0.58
VAMP1-207ENST00000539047 SH2D1AO60880 128 aa11.42□□□□□ -0.58
VAMP1-207ENST00000539047 RPS20P60866 119 aaKnown RBP11.42□□□□□ -0.58
VAMP1-207ENST00000539047 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
VAMP1-207ENST00000539047 FAM19A4Q96LR4 140 aa11.42□□□□□ -0.58
VAMP1-207ENST00000539047 C7orf71A4D174 169 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 TMEM189A5PLL7 270 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 C19orf71A6NCJ1 209 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 A8MTW9 85 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
VAMP1-207ENST00000539047 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
VAMP1-207ENST00000539047 ZNF124Q15973 351 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 SPINK13Q1W4C9 94 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 CT83Q5H943 113 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 ZFAND2AQ8N6M9 145 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 NUDT10Q8NFP7 164 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 NUDT11Q96G61 164 aa11.41□□□□□ -0.58
VAMP1-207ENST00000539047 A8MWL6 223 aa11.4□□□□□ -0.58
VAMP1-207ENST00000539047 KLLNB2CW77 178 aa11.4□□□□□ -0.58
VAMP1-207ENST00000539047 ORM1P02763 201 aa11.4□□□□□ -0.58
VAMP1-207ENST00000539047 MORN3Q6PF18 240 aaPredicted RBP11.4□□□□□ -0.58
VAMP1-207ENST00000539047 TRPT1Q86TN4 253 aaKnown RBP11.4□□□□□ -0.58
VAMP1-207ENST00000539047 BTF3L4Q96K17 158 aa11.4□□□□□ -0.58
VAMP1-207ENST00000539047 C1QTNF4Q9BXJ3 329 aa11.4□□□□□ -0.58
VAMP1-207ENST00000539047 M0R2Z0 102 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 INSP01308 110 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 BTN1A1Q13410 526 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 Q6AWC8 147 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 NAGKQ9UJ70 344 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 V9GYV3 84 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 MEGF8Q7Z7M0 2845 aa11.39□□□□□ -0.59
VAMP1-207ENST00000539047 MGAM2Q2M2H8 2515 aa11.38□□□□□ -0.59
VAMP1-207ENST00000539047 SCO1O75880 301 aa11.38□□□□□ -0.59
VAMP1-207ENST00000539047 ZNF80P51504 273 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-207ENST00000539047 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
VAMP1-207ENST00000539047 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
VAMP1-207ENST00000539047 SRD5A3Q9H8P0 318 aa11.38□□□□□ -0.59
VAMP1-207ENST00000539047 C19orf73Q9NVV2 129 aa11.38□□□□□ -0.59
VAMP1-207ENST00000539047 TRAV12-3A0A0B4J271 114 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 CRIP1P50238 77 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 FXYD7P58549 80 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 PRR9Q5T870 116 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 GFI1BQ5VTD9 330 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 LINC00322Q6ZN03 302 aaPredicted RBP11.37□□□□□ -0.59
VAMP1-207ENST00000539047 CBLN2Q8IUK8 224 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 DEFB125Q8N687 156 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 TSKUQ8WUA8 353 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 BORCS7Q96B45 105 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 KCNS1Q96KK3 526 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 WFDC10AQ9H1F0 79 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 AGRNO00468 2067 aa11.37□□□□□ -0.59
VAMP1-207ENST00000539047 TRAV12-2A0A075B6T6 113 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 TRAV9-1A0A075B6T8 112 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
VAMP1-207ENST00000539047 EGFEM1PQ0D2K5 195 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 URGCP-MRPS24S4R325 110 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 SORL1Q92673 2214 aa11.36□□□□□ -0.59
VAMP1-207ENST00000539047 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
VAMP1-207ENST00000539047 FAM231BA6NCW3 169 aa11.35□□□□□ -0.59
VAMP1-207ENST00000539047 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
VAMP1-207ENST00000539047 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
VAMP1-207ENST00000539047 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
VAMP1-207ENST00000539047 APOC4P55056 127 aa11.35□□□□□ -0.59
VAMP1-207ENST00000539047 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
VAMP1-207ENST00000539047 TMEM208Q9BTX3 173 aa11.35□□□□□ -0.59
VAMP1-207ENST00000539047 LOC102724200A0A096LPH7 203 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms