RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 GSN-AS1Q9NRJ2 163 aa8.09□□□□□ -1.11
RTN3-209ENST00000538995 CCL18P55774 89 aa8.08□□□□□ -1.12
RTN3-209ENST00000538995 OR5I1Q13606 314 aa8.08□□□□□ -1.12
RTN3-209ENST00000538995 Q6AWC8 147 aa8.08□□□□□ -1.12
RTN3-209ENST00000538995 Q6ZTI0 123 aa8.08□□□□□ -1.12
RTN3-209ENST00000538995 HSD17B11Q8NBQ5 300 aa8.08□□□□□ -1.12
RTN3-209ENST00000538995 INO80EQ8NBZ0 244 aaPredicted RBP8.08□□□□□ -1.12
RTN3-209ENST00000538995 GNPNAT1Q96EK6 184 aaPredicted RBP8.08□□□□□ -1.12
RTN3-209ENST00000538995 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
RTN3-209ENST00000538995 IGLV2-18A0A075B6J9 118 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 TRGV2A0A075B6R0 118 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 TRAV26-1A0A087WT03 109 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 SERTM2A0A1B0GWG4 89 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 PGPA6NDG6 321 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 M0R2N4 97 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 SPINK4O60575 86 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 STAG3L2P0CL84 134 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 STAG3L3P0CL85 134 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 ARL14EPLP0DKL9 152 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 HOXA5P20719 270 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 ATP6V0CP27449 155 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 Q5BKY6 102 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 SOHLH1Q5JUK2 328 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 ST6GAL2Q96JF0 529 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 HYLS1Q96M11 299 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 TMPRSS5Q9H3S3 457 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 TNFSF18Q9UNG2 199 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 KLF12Q9Y4X4 402 aa8.07□□□□□ -1.12
RTN3-209ENST00000538995 FXYD6-FXYD2A0A087WZ82 144 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 BORCS7-ASMTA0A0B4J1R7 106 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 RNF222A6NCQ9 220 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 RTL8CO15255 209 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 EIF3GO75821 320 aaKnown RBP eCLIP8.06□□□□□ -1.121e-11■■■□□ 15.7
RTN3-209ENST00000538995 ZNF415Q09FC8 603 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 OR2T35Q8NGX2 323 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 ZNRF2Q8NHG8 242 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 SUN5Q8TC36 379 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 RAB24Q969Q5 203 aa8.06□□□□□ -1.12
RTN3-209ENST00000538995 PKHD1P08F94 4074 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 GCHFRP30047 84 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 TDRG1Q3Y452 100 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 C5orf17Q8NAS9 161 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 TMEM167BQ9NRX6 74 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 TP53TG3Q9ULZ0 132 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
RTN3-209ENST00000538995 A0A0J9YY99 117 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 PRSS29PA6NIE9 313 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
RTN3-209ENST00000538995 CXorf1O96002 111 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 SLAQ13239 276 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 RPL7L1Q6DKI1 246 aaKnown RBP8.04□□□□□ -1.12
RTN3-209ENST00000538995 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 Q6ZQT7 251 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 SSX7Q7RTT5 188 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 ACTR3CQ9C0K3 210 aaPredicted RBP8.04□□□□□ -1.12
RTN3-209ENST00000538995 SH3BGRL3Q9H299 93 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 RPH3ALQ9UNE2 315 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
RTN3-209ENST00000538995 TRAV21A0A0B4J279 112 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 K7EQM0 130 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 TAAR5O14804 337 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 SPXQ9BT56 116 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 NDFIP1Q9BT67 221 aa8.03□□□□□ -1.12
RTN3-209ENST00000538995 MRPL16Q9NX20 251 aaKnown RBP8.03□□□□□ -1.12
RTN3-209ENST00000538995 DNAH11Q96DT5 4516 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 TRAV8-1A0A0A6YYK1 113 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 FBLL1A6NHQ2 334 aaKnown RBP8.02□□□□□ -1.13
RTN3-209ENST00000538995 G3V3Q6 166 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 TCRAP04437 139 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 GNG5P63218 68 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 TMEM183BQ1AE95 376 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 TTC32Q5I0X7 151 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 TMEM183AQ8IXX5 376 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 RASL10AQ92737 203 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 VSIG2Q96IQ7 327 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 TREM1Q9NP99 234 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 MDFICQ9P1T7 246 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 PRO0255Q9UI72 69 aa8.02□□□□□ -1.13
RTN3-209ENST00000538995 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
RTN3-209ENST00000538995 MUC4Q99102 2169 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 A0A096LPF7 62 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 CTXND1A0A1B0GTU2 59 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 A0A1W2PRE2 83 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 GGTLC3B5MD39 225 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 CYB561D1Q8N8Q1 229 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 TVP23CQ96ET8 276 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 KCNS1Q96KK3 526 aa8.01□□□□□ -1.13
RTN3-209ENST00000538995 PKD1P98161 4303 aa8□□□□□ -1.13
RTN3-209ENST00000538995 A0A1W2PPQ1 181 aa8□□□□□ -1.13
RTN3-209ENST00000538995 F6UZH7 168 aa8□□□□□ -1.13
RTN3-209ENST00000538995 ARPC5O15511 151 aa8□□□□□ -1.13
RTN3-209ENST00000538995 PAX4O43316 350 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms