RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
CDCA3-207ENST00000538862 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
CDCA3-207ENST00000538862 UBE2E1P51965 193 aa11.26□□□□□ -0.61
CDCA3-207ENST00000538862 ZNF502Q8TBZ5 544 aa11.26□□□□□ -0.61
CDCA3-207ENST00000538862 WFDC12Q8WWY7 111 aa11.26□□□□□ -0.61
CDCA3-207ENST00000538862 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
CDCA3-207ENST00000538862 IGHV4-30-2A0A087WSY4 118 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 A0A087X0K7 114 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 IGLC6P0CF74 106 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-207ENST00000538862 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 VGLL1Q99990 258 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 IGHV2-70DA0A0C4DH43 119 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 MRPL51Q4U2R6 128 aaKnown RBP11.25□□□□□ -0.61
CDCA3-207ENST00000538862 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 FER1L6-AS1Q8NA97 138 aa11.25□□□□□ -0.61
CDCA3-207ENST00000538862 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
CDCA3-207ENST00000538862 RBAKDNA6NC62 111 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 LY6G6DO95868 133 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 ZNF80P51504 273 aaPredicted RBP11.24□□□□□ -0.61
CDCA3-207ENST00000538862 EFNA4P52798 201 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 DPF1Q92782 380 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 AJUBAQ96IF1 538 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 PMCHL2Q9BQD1 86 aa11.24□□□□□ -0.61
CDCA3-207ENST00000538862 A0A096LNJ9 63 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 H0Y8G0 127 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 MPV17L2Q567V2 206 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 SMPXQ9UHP9 88 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 TIMM8BQ9Y5J9 83 aaPredicted RBP11.23□□□□□ -0.61
CDCA3-207ENST00000538862 HIVEP2P31629 2446 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 BUB3O43684 328 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 SCGB1A1P11684 91 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 GPR183P32249 361 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 TWIST1Q15672 202 aa11.23□□□□□ -0.61
CDCA3-207ENST00000538862 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
CDCA3-207ENST00000538862 ABCA2Q9BZC7 2435 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 LOC389332A0A1B0GUA5 103 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 K7ERU9 68 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 NUDT3O95989 172 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 CLEC3BP05452 202 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 COX8AP10176 69 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 RHOGP84095 191 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 FAM106AQ4KMX7 169 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 OCIAD2Q56VL3 154 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 Q8TAT8 98 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
CDCA3-207ENST00000538862 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 CKS2P33552 79 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-207ENST00000538862 PAX8Q06710 450 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 LGALS9BQ3B8N2 356 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
CDCA3-207ENST00000538862 NCR2O95944 276 aa11.21□□□□□ -0.62
CDCA3-207ENST00000538862 HBDP02042 147 aa11.21□□□□□ -0.62
CDCA3-207ENST00000538862 LOXL1Q08397 574 aaPredicted RBP11.21□□□□□ -0.62
CDCA3-207ENST00000538862 ECSCRQ19T08 205 aa11.21□□□□□ -0.62
CDCA3-207ENST00000538862 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.62
CDCA3-207ENST00000538862 C10orf105Q8TEF2 133 aa11.21□□□□□ -0.62
CDCA3-207ENST00000538862 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 A0A1B0GV72 72 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 ORM1P02763 201 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 SAA4P35542 130 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
CDCA3-207ENST00000538862 ANK3Q12955 4377 aaKnown RBP11.2□□□□□ -0.62
CDCA3-207ENST00000538862 A0A096LNT2 108 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 IGHV3-35A0A0C4DH35 117 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 KRTAP1-1Q07627 177 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 Q6ZVH6 145 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 DEFB125Q8N687 156 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 OR8A1Q8NGG7 326 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 SVEP1Q4LDE5 3571 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 TRBV7-1A0A0A6YYK4 115 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 NPYP01303 97 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 LMO4P61968 165 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
CDCA3-207ENST00000538862 JMJD1CQ15652 2540 aa11.18□□□□□ -0.62
CDCA3-207ENST00000538862 LINC01546A6NGU7 62 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms