RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 IL17DQ8TAD2 202 aa9.38□□□□□ -0.91
CHFR-216ENST00000538235 NEU1Q99519 415 aa9.38□□□□□ -0.91
CHFR-216ENST00000538235 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 RBAKDNA6NC62 111 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 F6UZH7 168 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 PAGE4O60829 102 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
CHFR-216ENST00000538235 ZNF138P52744 262 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
CHFR-216ENST00000538235 BLOC1S1P78537 153 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 RNF212Q495C1 297 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 DPPA3Q6W0C5 159 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 C8orf49Q96NF6 230 aa9.37□□□□□ -0.91
CHFR-216ENST00000538235 AMBPP02760 352 aa9.36□□□□□ -0.91
CHFR-216ENST00000538235 MIFP14174 115 aa9.36□□□□□ -0.91
CHFR-216ENST00000538235 ZNF80P51504 273 aaPredicted RBP9.36□□□□□ -0.91
CHFR-216ENST00000538235 C12orf57Q99622 126 aa9.36□□□□□ -0.91
CHFR-216ENST00000538235 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
CHFR-216ENST00000538235 NACAE9PAV3 2078 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 TRAV1-1A0A0B4J248 108 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 C7orf71A4D174 169 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 LEPP41159 167 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 TMEM78Q5T7P6 136 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 C15orf54Q8N8G6 183 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 RXFP4Q8TDU9 374 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 PCNPQ8WW12 178 aaKnown RBP9.35□□□□□ -0.91
CHFR-216ENST00000538235 SMCO4Q9NRQ5 59 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 TP53TG3Q9ULZ0 132 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
CHFR-216ENST00000538235 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 SCO2A0A1W2PP80 73 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 PEX7O00628 323 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 S100PP25815 95 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
CHFR-216ENST00000538235 CSN1S1P47710 185 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 AKR1D1P51857 326 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 PMS2P11Q13670 270 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 Q86TA4 180 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 CYB561D1Q8N8Q1 229 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 CMTM2Q8TAZ6 248 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
CHFR-216ENST00000538235 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 PSG8Q9UQ74 426 aa9.34□□□□□ -0.91
CHFR-216ENST00000538235 RYR2Q92736 4967 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
CHFR-216ENST00000538235 S100A6P06703 90 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 EMP1P54849 157 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 C12orf74Q32Q52 190 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 TMEM75Q8N9X5 138 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 HYDINQ4G0P3 5121 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 MUC4Q99102 2169 aa9.33□□□□□ -0.92
CHFR-216ENST00000538235 HBE1P02100 147 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 TSPOP30536 169 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 RAB5CP51148 216 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 RRN3P1Q2M238 152 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 Q6AWC8 147 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 Q6ZTC4 211 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 LINC01587Q99440 93 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 TMEM208Q9BTX3 173 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 GNG13Q9P2W3 67 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 ARL2-SNX15V9GYD0 113 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 RYR3Q15413 4870 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
CHFR-216ENST00000538235 TRBV7-9A0A0J9YWB2 115 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 SMIM9A6NGZ8 99 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 PCP4L1A6NKN8 68 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 H7BYZ3 331 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 GPX1P07203 203 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 HTN1P15515 57 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 TAS2R60P59551 318 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 PEA15Q15121 130 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 MUC21Q5SSG8 566 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 CST9LP1Q5W188 147 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 PRNTQ86SH4 94 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 LYPD6BQ8NI32 183 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
CHFR-216ENST00000538235 MT-ND4LP03901 98 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 CRIP1P50238 77 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 ZNF575Q86XF7 245 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 TREM1Q9NP99 234 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 KLF12Q9Y4X4 402 aa9.3□□□□□ -0.92
CHFR-216ENST00000538235 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms