RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 CBY3A6NI87 242 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 F5H768 121 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 CT45A10P0DMU9 189 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 TMEM78Q5T7P6 136 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 C9orf47Q6ZRZ4 202 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 ARL6IP6Q8N6S5 226 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 SUN5Q8TC36 379 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
LRRK1-211ENST00000538064 IGKV2-40A0A087WW87 121 aaPredicted RBP10.47□□□□□ -0.73
LRRK1-211ENST00000538064 A0A1B0GVG6 124 aa10.47□□□□□ -0.73
LRRK1-211ENST00000538064 RBAKDNA6NC62 111 aa10.47□□□□□ -0.73
LRRK1-211ENST00000538064 IGKV2D-40P01614 121 aaPredicted RBP10.47□□□□□ -0.73
LRRK1-211ENST00000538064 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
LRRK1-211ENST00000538064 ERCC8Q13216 396 aa10.47□□□□□ -0.73
LRRK1-211ENST00000538064 DPPA3Q6W0C5 159 aa10.47□□□□□ -0.73
LRRK1-211ENST00000538064 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
LRRK1-211ENST00000538064 AGPAT4-IT1Q9H0P7 198 aa10.47□□□□□ -0.73
LRRK1-211ENST00000538064 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 ZNF726P1Q15940 193 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 SSX7Q7RTT5 188 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 SLC51BQ86UW2 128 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 CCDC28AQ8IWP9 274 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.73
LRRK1-211ENST00000538064 DIRC3C9JPN6 131 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 J3KRW8 73 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 ZNF138P52744 262 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 FAM213BQ8TBF2 198 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 PYGO2Q9BRQ0 406 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 ATG101Q9BSB4 218 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
LRRK1-211ENST00000538064 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 SERTM2A0A1B0GWG4 89 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 A0A1W2PRE2 83 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 SNURFLB1AK76 121 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 KLLNB2CW77 178 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 NMBP08949 121 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 RAB5CP51148 216 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 CD300CQ08708 224 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 C5orf17Q8NAS9 161 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 VGLL1Q99990 258 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
LRRK1-211ENST00000538064 C7orf71A4D174 169 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 K7EQM0 130 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 NUDT3O95989 172 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 FGF8P55075 233 aaPredicted RBP10.43□□□□□ -0.74
LRRK1-211ENST00000538064 SUMO1P63165 101 aaKnown RBP10.43□□□□□ -0.74
LRRK1-211ENST00000538064 SOHLH1Q5JUK2 328 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 C9orf62Q8N4C0 152 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 ZNF680Q8NEM1 530 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 SFT2D1Q8WV19 159 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 NKX6-2Q9C056 277 aaPredicted RBP10.43□□□□□ -0.74
LRRK1-211ENST00000538064 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
LRRK1-211ENST00000538064 GPX1P07203 203 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 CRISP2P16562 243 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 FHITP49789 147 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
LRRK1-211ENST00000538064 GOLT1AQ6ZVE7 132 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 LINC00467Q9BRT7 94 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 TMPRSS5Q9H3S3 457 aa10.42□□□□□ -0.74
LRRK1-211ENST00000538064 TEX46H3BTG2 121 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 GNG5P63218 68 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 BTN1A1Q13410 526 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 Q8TAT8 98 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 EPDR1Q9UM22 224 aa10.41□□□□□ -0.74
LRRK1-211ENST00000538064 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
LRRK1-211ENST00000538064 GGTLC3B5MD39 225 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 ZNF324O75467 553 aaPredicted RBP10.4□□□□□ -0.74
LRRK1-211ENST00000538064 GAGE7O76087 117 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 IFNA7P01567 189 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 TCRAP04437 139 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 PPT1P50897 306 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 CCL18P55774 89 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 UBE2G2P60604 165 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 ZFAND2AQ8N6M9 145 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 NDFIP1Q9BT67 221 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 LINC00588Q9Y4M8 146 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 MUC4Q99102 2169 aa10.4□□□□□ -0.74
LRRK1-211ENST00000538064 TRAV26-1A0A087WT03 109 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 NBDYA0A0U1RRE5 68 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 FAM74A7A6NL05 159 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 HOXA5P20719 270 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 RNASE4P34096 147 aaKnown RBP10.39□□□□□ -0.75
LRRK1-211ENST00000538064 SULT1A2P50226 295 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 OR5I1Q13606 314 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 ANXA2RQ3ZCQ2 193 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 Q6ZTI0 123 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms