RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FXYD2P54710 66 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 IGLV3-21P80748 117 aaPredicted RBP4.59□□□□□ -1.67
CSMD1-215ENST00000537824 CCL3L1P16619 93 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 ZNF726P1Q15940 193 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 LINC00312Q9Y6C7 94 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 TRAV26-2A0A0B4J265 109 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 TMEM141Q96I45 108 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 A0A0B4J2C4 111 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 J3QW42 95 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 C15orf32Q32M92 178 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 ANKRD39Q53RE8 183 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.59□□□□□ -1.67
CSMD1-215ENST00000537824 EFEMP2O95967 443 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 K7EN84 100 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 CRLF1O75462 422 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 IGFL4Q6B9Z1 124 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 IGHV1-45A0A0A0MS14 117 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 COX6A1P12074 109 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 NDPQ00604 133 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 FAM90A1Q86YD7 464 aa4.59□□□□□ -1.67
CSMD1-215ENST00000537824 RBX1P62877 108 aa4.59□□□□□ -1.68
CSMD1-215ENST00000537824 STAB1Q9NY15 2570 aa4.59□□□□□ -1.68
CSMD1-215ENST00000537824 FOXI1Q12951 378 aa4.59□□□□□ -1.68
CSMD1-215ENST00000537824 LINC01545Q5VT33 79 aa4.59□□□□□ -1.68
CSMD1-215ENST00000537824 MRPL55Q7Z7F7 128 aaKnown RBP4.59□□□□□ -1.68
CSMD1-215ENST00000537824 A0A0G2JRQ6 117 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 TIMM23O14925 209 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 PCOLCEQ15113 449 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 SPANXB1Q9NS25 103 aaPredicted RBP4.58□□□□□ -1.68
CSMD1-215ENST00000537824 CFC1BP0CG36 223 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 CFC1P0CG37 223 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 SRSF2Q01130 221 aaKnown RBP4.58□□□□□ -1.68
CSMD1-215ENST00000537824 A0A087WX48 190 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 Q6P435 159 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 TMEM75Q8N9X5 138 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 H0YJW9 148 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 RNASE2P10153 161 aaKnown RBP4.58□□□□□ -1.68
CSMD1-215ENST00000537824 TRPT1Q86TN4 253 aaKnown RBP4.58□□□□□ -1.68
CSMD1-215ENST00000537824 VOPP1Q96AW1 172 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 EFNA4P52798 201 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 RPL32P62910 135 aaKnown RBP4.58□□□□□ -1.68
CSMD1-215ENST00000537824 TRAV13-2A0A0B4J235 113 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 SPTSSBQ8NFR3 76 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 LINC00527Q9UJ94 153 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 TRAV25A0A0B4J276 109 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 LINC00473A8K010 186 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 FOXF2Q12947 444 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 CRYGBP07316 175 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 DAD1P61803 113 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 CENPVQ7Z7K6 275 aaPredicted RBP4.58□□□□□ -1.68
CSMD1-215ENST00000537824 SHANK2-AS3Q9BTD1 123 aa4.58□□□□□ -1.68
CSMD1-215ENST00000537824 C16orf54Q6UWD8 224 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 C2orf66Q6UXQ4 117 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 CCL21O00585 134 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 DEFB124Q8NES8 71 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 WIPF2Q8TF74 440 aaPredicted RBP4.57□□□□□ -1.68
CSMD1-215ENST00000537824 CHCHD2Q9Y6H1 151 aaPredicted RBP4.57□□□□□ -1.68
CSMD1-215ENST00000537824 RFPL3SP0C7P2 107 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 HIGD1BQ9P298 99 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 Q6ZT83 130 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 C6orf226Q5I0X4 101 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 PEMTQ9UBM1 199 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 TRAV12-2A0A075B6T6 113 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 AHRRA9YTQ3 701 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 PSMB8P28062 276 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 FDCSPQ8NFU4 85 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 DUSP14O95147 198 aaKnown RBP4.57□□□□□ -1.68
CSMD1-215ENST00000537824 FAM231DQ6ZW35 169 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 TRBV6-6A0A0A6YYG2 114 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 ACYP1P07311 99 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 ATP6V0E2Q8NHE4 81 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 PTH2Q96A98 100 aa4.57□□□□□ -1.68
CSMD1-215ENST00000537824 TRBV25-1A0A075B6N4 114 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 LINC00205P59089 165 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 ZCCHC24Q8N2G6 241 aaKnown RBP4.56□□□□□ -1.68
CSMD1-215ENST00000537824 BSPH1Q075Z2 132 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 ZNF747Q9BV97 191 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 SMIM2Q9BVW6 85 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 PAX9P55771 341 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 NRN1LQ496H8 165 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 FAM168AQ92567 244 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 C20orf204Q6ZNR8 217 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 C11orf52Q96A22 123 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 CRYGSP22914 178 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 PAX8Q06710 450 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 C5orf64Q2M2E5 130 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 ICOSQ9Y6W8 199 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 DTX1Q86Y01 620 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 LYPD1Q8N2G4 141 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 PRR7Q8TB68 274 aa4.56□□□□□ -1.68
CSMD1-215ENST00000537824 Q6ZS49 121 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 SPATA12Q7Z6I5 190 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 HERVK_113P63121 156 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 PLA2G2EQ9NZK7 142 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 DKK1O94907 266 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 SPATA25Q9BR10 227 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 PSPNO60542 156 aa4.55□□□□□ -1.68
CSMD1-215ENST00000537824 WFDC9Q8NEX5 89 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms