RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
VPS33A-203ENST00000536212 RABAC1Q9UI14 185 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 SPEGQ15772 3267 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 TRIOO75962 3097 aa4.42□□□□□ -1.7
VPS33A-203ENST00000536212 FAM186AA6NE01 2351 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 TRAV26-1A0A087WT03 109 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 OR2T8A6NH00 312 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 FABP5P3A8MUU1 101 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 G3V4G9 280 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 H3BRM9 83 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 NDUFS7O75251 213 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 NPYP01303 97 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 ADORA2A-AS1P86434 159 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 FOXE3Q13461 319 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 HES1Q14469 280 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 DTX2Q86UW9 622 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 OR9G4Q8NGQ1 327 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 ZNF502Q8TBZ5 544 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 IFI27L1Q96BM0 104 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
VPS33A-203ENST00000536212 VGLL1Q99990 258 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 SIRPDQ9H106 197 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 S4R3C0 116 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 VCANP13611 3396 aa4.41□□□□□ -1.7
VPS33A-203ENST00000536212 TMSB15BA0A087X1C1 80 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 TRAV8-6A0A0B4J262 113 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 LOC389332A0A1B0GUA5 103 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 BUB3O43684 328 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 FSHBP01225 129 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 HLA-DMBP28068 263 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 FCER1GP30273 86 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 CKS2P33552 79 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 CACNG7P62955 275 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 HSD52Q0P140 79 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 AMMECR1LQ6DCA0 310 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 UFSP1Q6NVU6 142 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 OR4X2Q8NGF9 303 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 OR8A1Q8NGG7 326 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 SLC50A1Q9BRV3 221 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 MAP1LC3AQ9H492 121 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
VPS33A-203ENST00000536212 PRUNE2Q8WUY3 3088 aa4.4□□□□□ -1.71
VPS33A-203ENST00000536212 ARFGEF3Q5TH69 2177 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 IGLV2-18A0A075B6J9 118 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 TRGV11A0A075B6L2 103 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 IGHV4-4A0A075B6R2 117 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 A0A1W2PRD5 423 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 A0A1W2PRF3 423 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 A0A1W2PRM7 423 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 CLPSL1A2RUU4 121 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 CCL21O00585 134 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 LY6HO94772 140 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 CDSNQ15517 529 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 TWIST1Q15672 202 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 BEAN1Q3B7T3 259 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 ADAMTSL5Q6ZMM2 481 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 GTF2H5Q6ZYL4 71 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 Q8TAT8 98 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 MRAPQ8TCY5 172 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 PTH2Q96A98 100 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 HIGD1BQ9P298 99 aa4.39□□□□□ -1.71
VPS33A-203ENST00000536212 TRAV8-2A0A0B4J237 113 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 C7orf71A4D174 169 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 A6NDN8 102 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 NCBP2LA6PVI3 153 aaKnown RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 SMKR1H3BMG3 65 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 SNAI2O43623 268 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 SAP30O75446 220 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 ATP5LO75964 103 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 IGHV3-23P01764 117 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 PRB4P10163 310 aaPredicted RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 HLA-DRB4P13762 266 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 EVI2AP22794 236 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 GATA3P23771 443 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 ZFP36P26651 326 aaKnown RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 UBE2E1P51965 193 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 CRIP2P52943 208 aaPredicted RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 SUMO2P61956 95 aaKnown RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 RPL24P83731 157 aaKnown RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 GAGE5Q13069 117 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 GAGE6Q13070 117 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 ERCC8Q13216 396 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 Q8N8P6 123 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 AGPAT4-IT1Q9H0P7 198 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 MSRB1Q9NZV6 116 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 HHLA3Q9XRX5 114 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 TIMM8BQ9Y5J9 83 aaPredicted RBP4.38□□□□□ -1.71
VPS33A-203ENST00000536212 LENEPQ9Y5L5 61 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 HLA-DRB4X5D2U9 266 aa4.38□□□□□ -1.71
VPS33A-203ENST00000536212 OTOGLQ3ZCN5 2332 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 TRBV7-1A0A0A6YYK4 115 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 IGHV7-4-1A0A0J9YVY3 117 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 CENPVL3A0A0U1RRI6 287 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 K7EP34 96 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 ATP6V0E1O15342 81 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms