RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CT45A10P0DMU9 189 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 CDKN1BP46527 198 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 TCTAP57738 103 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 MEF2BQ02080 365 aaPredicted RBP11.62□□□□□ -0.55
ATL3-202ENST00000535789 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 CST9LP1Q5W188 147 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 EXOC3-AS1Q8N2X6 119 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 RXFP4Q8TDU9 374 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 NIPSNAP3BQ9BS92 247 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 TMEM208Q9BTX3 173 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 OTORQ9NRC9 128 aa11.62□□□□□ -0.55
ATL3-202ENST00000535789 SUMO1P63165 101 aaKnown RBP11.61□□□□□ -0.55
ATL3-202ENST00000535789 EIF4E3Q8N5X7 224 aaKnown RBP11.61□□□□□ -0.55
ATL3-202ENST00000535789 NKX6-2Q9C056 277 aaPredicted RBP11.61□□□□□ -0.55
ATL3-202ENST00000535789 EIF5A2Q9GZV4 153 aaKnown RBP11.61□□□□□ -0.55
ATL3-202ENST00000535789 PGPA6NDG6 321 aa11.6□□□□□ -0.55
ATL3-202ENST00000535789 C9JQL5 133 aa11.6□□□□□ -0.55
ATL3-202ENST00000535789 NDUFS6O75380 124 aaKnown RBP11.6□□□□□ -0.55
ATL3-202ENST00000535789 TSPOP30536 169 aa11.6□□□□□ -0.55
ATL3-202ENST00000535789 ERCC8Q13216 396 aa11.6□□□□□ -0.55
ATL3-202ENST00000535789 RNASE8Q8TDE3 154 aaKnown RBP11.6□□□□□ -0.55
ATL3-202ENST00000535789 MRPL53Q96EL3 112 aaKnown RBP11.6□□□□□ -0.55
ATL3-202ENST00000535789 NDUFA5Q16718 116 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 UQCC3Q6UW78 93 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 TMEM256Q8N2U0 113 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 OR10J6PQ8NGY7 276 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 FAM19A4Q96LR4 140 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 ODF3Q96PU9 254 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 AAMDCQ9H7C9 122 aa11.59□□□□□ -0.55
ATL3-202ENST00000535789 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
ATL3-202ENST00000535789 TEX48A0A1B0GUV7 120 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 SCO2A0A1W2PP80 73 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 J3KRW8 73 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
ATL3-202ENST00000535789 SLC25A5P05141 298 aaKnown RBP11.58□□□□□ -0.56
ATL3-202ENST00000535789 SRP19P09132 144 aaKnown RBP11.58□□□□□ -0.56
ATL3-202ENST00000535789 TAS2R60P59551 318 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 GNG5P63218 68 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 PEA15Q15121 130 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 PRR9Q5T870 116 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 SLC7A5P1Q8MH63 180 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 C11orf52Q96A22 123 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 LINC01587Q99440 93 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 TCEAL7Q9BRU2 100 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
ATL3-202ENST00000535789 F6UZH7 168 aa11.57□□□□□ -0.56
ATL3-202ENST00000535789 PDE6DO43924 150 aa11.57□□□□□ -0.56
ATL3-202ENST00000535789 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
ATL3-202ENST00000535789 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
ATL3-202ENST00000535789 EPDR1Q9UM22 224 aa11.57□□□□□ -0.56
ATL3-202ENST00000535789 LYRM9A8MSI8 78 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 TMEM250H0YL14 139 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 PEX7O00628 323 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 HTN3P15516 51 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 DAD1P61803 113 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 Q6ZQT7 251 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 VGLL1Q99990 258 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 NDUFAF3Q9BU61 184 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 TREM1Q9NP99 234 aa11.56□□□□□ -0.56
ATL3-202ENST00000535789 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 KLLNB2CW77 178 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 H7BYZ3 331 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 TCRAP04437 139 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 HTN1P15515 57 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 BTN1A1Q13410 526 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 CYB561D1Q8N8Q1 229 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
ATL3-202ENST00000535789 HIST1H2BAQ96A08 127 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 ATG101Q9BSB4 218 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 RPH3ALQ9UNE2 315 aa11.55□□□□□ -0.56
ATL3-202ENST00000535789 LEPP41159 167 aa11.54□□□□□ -0.56
ATL3-202ENST00000535789 TMEM88Q6PEY1 159 aa11.54□□□□□ -0.56
ATL3-202ENST00000535789 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
ATL3-202ENST00000535789 GOLT1AQ6ZVE7 132 aa11.54□□□□□ -0.56
ATL3-202ENST00000535789 ZFAND2AQ8N6M9 145 aa11.54□□□□□ -0.56
ATL3-202ENST00000535789 PKD1P98161 4303 aa11.54□□□□□ -0.56
ATL3-202ENST00000535789 SFTA3P0C7M3 94 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 DEFB130BP0DP73 79 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 DEFB130AP0DP74 79 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 CRISP2P16562 243 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 CSN1S1P47710 185 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 LINC00612Q8N6U2 182 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 Q8TAT8 98 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 DERL1Q9BUN8 251 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 PKHD1P08F94 4074 aa11.53□□□□□ -0.56
ATL3-202ENST00000535789 MUC4Q99102 2169 aa11.52□□□□□ -0.56
ATL3-202ENST00000535789 SERTM2A0A1B0GWG4 89 aa11.52□□□□□ -0.57
ATL3-202ENST00000535789 C7orf71A4D174 169 aa11.52□□□□□ -0.57
ATL3-202ENST00000535789 RBAKDNA6NC62 111 aa11.52□□□□□ -0.57
ATL3-202ENST00000535789 ZNF324O75467 553 aaPredicted RBP11.52□□□□□ -0.57
ATL3-202ENST00000535789 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
ATL3-202ENST00000535789 AKR1C3P42330 323 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms