RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 C5orf64Q2M2E5 130 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 SFTA2Q6UW10 78 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 SPOCK3Q9BQ16 436 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 DPM3Q9P2X0 92 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 PTPRQQ9UMZ3 2332 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 SIVA1O15304 175 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 SMIM17P0DL12 118 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 RPL7P18124 248 aaKnown RBP10.37□□□□□ -0.75
HDAC4-214ENST00000535493 ARPC1AQ92747 370 aa10.37□□□□□ -0.75
HDAC4-214ENST00000535493 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
HDAC4-214ENST00000535493 BMI1P35226 326 aa10.36□□□□□ -0.75
HDAC4-214ENST00000535493 FABP5P3A8MUU1 101 aa10.36□□□□□ -0.75
HDAC4-214ENST00000535493 ZNF672Q499Z4 452 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-214ENST00000535493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-214ENST00000535493 OR5A1Q8NGJ0 315 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 RAB1BQ9H0U4 201 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 ETDBQ3ZM63 59 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 Q8NA96 180 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 PHLDA1Q8WV24 401 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-214ENST00000535493 AZU1P20160 251 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 INSL3P51460 131 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 ECSCRQ19T08 205 aa10.35□□□□□ -0.75
HDAC4-214ENST00000535493 FAM90A27PA6NNH2 459 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 DPM2O94777 84 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 CLEC3BP05452 202 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 CD3EP07766 207 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 DEFB1P60022 68 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 S100A7AQ86SG5 101 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 CEND1Q8N111 149 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
HDAC4-214ENST00000535493 MUC6Q6W4X9 2439 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 ZMAT4Q9H898 229 aa10.34□□□□□ -0.75
HDAC4-214ENST00000535493 CELSR2Q9HCU4 2923 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 B9A039 149 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 IGF1P05019 195 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 C15orf32Q32M92 178 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 PSMG3-AS1Q96PY0 264 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
HDAC4-214ENST00000535493 LINC01548A6NM66 108 aa10.32□□□□□ -0.76
HDAC4-214ENST00000535493 HIST1H4GQ99525 98 aa10.32□□□□□ -0.76
HDAC4-214ENST00000535493 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
HDAC4-214ENST00000535493 IGLL5B9A064 214 aa10.32□□□□□ -0.76
HDAC4-214ENST00000535493 RNF5Q99942 180 aa10.32□□□□□ -0.76
HDAC4-214ENST00000535493 SPG11Q96JI7 2443 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 G3V318 75 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 NPBQ8NG41 125 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 ZNF479Q96JC4 524 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 CLEC2AQ6UVW9 174 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 CLEC19AQ6UXS0 136 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 MYOZ3Q8TDC0 251 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 LINC00527Q9UJ94 153 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 CYSLTR1Q9Y271 337 aa10.31□□□□□ -0.76
HDAC4-214ENST00000535493 H3BVH4 76 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 ATP5G2Q06055 141 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 CDSNQ15517 529 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 C12orf74Q32Q52 190 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 SPANXN1Q5VSR9 72 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 WFDC12Q8WWY7 111 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 SRSF8Q9BRL6 282 aaKnown RBP10.3□□□□□ -0.76
HDAC4-214ENST00000535493 IGHV7-81A0A0B4J1V7 117 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 TTC9CQ8N5M4 171 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 Q8N8P6 123 aa10.3□□□□□ -0.76
HDAC4-214ENST00000535493 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 NRACQ8N912 160 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 M0R381 172 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 BUB3O43684 328 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 LAGE3Q14657 143 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 TM2D2Q9BX73 214 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 CNFNQ9BYD5 112 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
HDAC4-214ENST00000535493 E9PLD3 99 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 EMP1P54849 157 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 LINC01559Q495D7 138 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 PRR9Q5T870 116 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 OR11H6Q8NGC7 330 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-214ENST00000535493 SPANXB1Q9NS25 103 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-214ENST00000535493 IGHV7-4-1A0A0J9YVY3 117 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 CEACAM3P40198 252 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 LY6G5BQ8NDX9 201 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.28□□□□□ -0.761e-6■■■■□ 19.8
HDAC4-214ENST00000535493 CREBBPQ92793 2442 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 SORL1Q92673 2214 aa10.28□□□□□ -0.76
HDAC4-214ENST00000535493 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.76
HDAC4-214ENST00000535493 GAGE12HA6NDE8 117 aa10.27□□□□□ -0.76
HDAC4-214ENST00000535493 RPL39LQ96EH5 51 aaKnown RBP10.27□□□□□ -0.76
HDAC4-214ENST00000535493 ATP5LO75964 103 aa10.27□□□□□ -0.77
HDAC4-214ENST00000535493 MSRB2Q9Y3D2 182 aa10.27□□□□□ -0.77
HDAC4-214ENST00000535493 CLPSL1A2RUU4 121 aa10.27□□□□□ -0.77
HDAC4-214ENST00000535493 ZFP36P26651 326 aaKnown RBP10.27□□□□□ -0.77
HDAC4-214ENST00000535493 TMEM78Q5T7P6 136 aa10.27□□□□□ -0.77
HDAC4-214ENST00000535493 SIGMAR1Q99720 223 aa10.27□□□□□ -0.77
HDAC4-214ENST00000535493 TRAV8-2A0A0B4J237 113 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 ATP6V0E1O15342 81 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms