RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 NXPH4O95158 308 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 NDUFB4O95168 129 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 ORM1P02763 201 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 ASAH1Q13510 395 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 C11orf72Q8NBR9 251 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 TXNDC17Q9BRA2 123 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 SPXQ9BT56 116 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 NDFIP1Q9BT67 221 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 MRPL16Q9NX20 251 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 NAGKQ9UJ70 344 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 KLF12Q9Y4X4 402 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 DNAH2Q9P225 4427 aa9.16□□□□□ -0.94
CLSTN3-205ENST00000535452 C9JCJ5 164 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 LINC00315P59091 139 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 SH2D6Q7Z4S9 175 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 C8orf49Q96NF6 230 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 RPH3ALQ9UNE2 315 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 LENEPQ9Y5L5 61 aa9.15□□□□□ -0.94
CLSTN3-205ENST00000535452 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.95
CLSTN3-205ENST00000535452 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 K7EQM0 130 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 MUC21Q5SSG8 566 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 Q8TAT8 98 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 SCRT2Q9NQ03 307 aa9.14□□□□□ -0.95
CLSTN3-205ENST00000535452 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 SIX6O95475 246 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 CRYBA4P53673 196 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 IL15RAQ13261 267 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 ZNF266Q14584 549 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 TMEM183BQ1AE95 376 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 TMEM183AQ8IXX5 376 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
CLSTN3-205ENST00000535452 MUC4Q99102 2169 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 PSCAO43653 123 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 PPT1P50897 306 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 Q8N1X5 172 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 NHLRC2Q8NBF2 726 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 KCNS1Q96KK3 526 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 SH3BGRL3Q9H299 93 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 SDF2L1Q9HCN8 221 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 OTORQ9NRC9 128 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 OR5AC2Q9NZP5 309 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
CLSTN3-205ENST00000535452 UPK1BO75841 260 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 PQLC2Q6ZP29 291 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 PPP1R1CQ8WVI7 109 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 TMED6Q8WW62 240 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 FAM167A-AS1Q96KT0 104 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 TP53TG3Q9ULZ0 132 aa9.11□□□□□ -0.95
CLSTN3-205ENST00000535452 PGPA6NDG6 321 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 DIRC3C9JPN6 131 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 GYPEP15421 78 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 SMIM3Q9BZL3 60 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 HSPB11Q9Y547 144 aa9.1□□□□□ -0.95
CLSTN3-205ENST00000535452 TRAV8-6A0A0B4J262 113 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 M0R2P5 195 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 FHL2Q14192 279 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 PRR9Q5T870 116 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 Q6AWC8 147 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 OR10G4Q8NGN3 311 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 RASL10AQ92737 203 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 PRADC1Q9BSG0 188 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 TREM1Q9NP99 234 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
CLSTN3-205ENST00000535452 PKHD1P08F94 4074 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 PCLOQ9Y6V0 5065 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 K7EQD1 137 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 CIDEAO60543 219 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 MPC2O95563 127 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 ARL6IP6Q8N6S5 226 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 FRZBQ92765 325 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 PKD1P98161 4303 aa9.08□□□□□ -0.96
CLSTN3-205ENST00000535452 CRYGDP07320 174 aa9.07□□□□□ -0.96
CLSTN3-205ENST00000535452 PFN1P07737 140 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-205ENST00000535452 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms