RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 RPL12P30050 165 aaKnown RBP12.99□□□□□ -0.33
NDUFS3-213ENST00000534716 DEFA1P59665 94 aa12.99□□□□□ -0.33
NDUFS3-213ENST00000534716 DEFA3P59666 94 aa12.99□□□□□ -0.33
NDUFS3-213ENST00000534716 ZNF266Q14584 549 aa12.99□□□□□ -0.33
NDUFS3-213ENST00000534716 Q6ZQT7 251 aa12.99□□□□□ -0.33
NDUFS3-213ENST00000534716 ST6GAL2Q96JF0 529 aa12.99□□□□□ -0.33
NDUFS3-213ENST00000534716 SSNA1O43805 119 aa12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 IFNA5P01569 189 aa12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 TAS2R45P59539 299 aa12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 RANP62826 216 aaKnown RBP12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 FFAR4Q5NUL3 377 aa12.98□□□□□ -0.33
NDUFS3-213ENST00000534716 DNAH5Q8TE73 4624 aa12.97□□□□□ -0.33
NDUFS3-213ENST00000534716 SLAQ13239 276 aa12.97□□□□□ -0.33
NDUFS3-213ENST00000534716 Q8TAT8 98 aa12.97□□□□□ -0.33
NDUFS3-213ENST00000534716 SCGB1C1Q8TD33 95 aa12.97□□□□□ -0.33
NDUFS3-213ENST00000534716 TMED6Q8WW62 240 aa12.97□□□□□ -0.33
NDUFS3-213ENST00000534716 DIRC3C9JPN6 131 aa12.96□□□□□ -0.33
NDUFS3-213ENST00000534716 Q6AWC8 147 aa12.96□□□□□ -0.33
NDUFS3-213ENST00000534716 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
NDUFS3-213ENST00000534716 ARPC5LQ9BPX5 153 aa12.96□□□□□ -0.33
NDUFS3-213ENST00000534716 APOBP04114 4563 aaKnown RBP12.95□□□□□ -0.34
NDUFS3-213ENST00000534716 C16orf90A8MZG2 172 aa12.95□□□□□ -0.34
NDUFS3-213ENST00000534716 CDK2AP2O75956 126 aa12.95□□□□□ -0.34
NDUFS3-213ENST00000534716 ZNF415Q09FC8 603 aa12.95□□□□□ -0.34
NDUFS3-213ENST00000534716 MBD2Q9UBB5 411 aa12.95□□□□□ -0.34
NDUFS3-213ENST00000534716 PRO0255Q9UI72 69 aa12.95□□□□□ -0.34
NDUFS3-213ENST00000534716 PAX4O43316 350 aa12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 FHL2Q14192 279 aa12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 SMIM3Q9BZL3 60 aa12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 WFDC1Q9HC57 220 aa12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
NDUFS3-213ENST00000534716 CRYBA4P53673 196 aa12.93□□□□□ -0.34
NDUFS3-213ENST00000534716 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
NDUFS3-213ENST00000534716 PQLC2Q6ZP29 291 aa12.93□□□□□ -0.34
NDUFS3-213ENST00000534716 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
NDUFS3-213ENST00000534716 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
NDUFS3-213ENST00000534716 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
NDUFS3-213ENST00000534716 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
NDUFS3-213ENST00000534716 RASL10AQ92737 203 aa12.92□□□□□ -0.34
NDUFS3-213ENST00000534716 SPXQ9BT56 116 aa12.92□□□□□ -0.34
NDUFS3-213ENST00000534716 PGPA6NDG6 321 aa12.91□□□□□ -0.34
NDUFS3-213ENST00000534716 FAM74A1Q5RGS3 127 aa12.91□□□□□ -0.34
NDUFS3-213ENST00000534716 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
NDUFS3-213ENST00000534716 TRGV11A0A075B6L2 103 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 SIVA1O15304 175 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 IGHV3-53P01767 116 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 MRPL23Q16540 153 aaKnown RBP12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 FAM159AQ6UWV7 190 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 CMTM2Q8TAZ6 248 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 MUC4Q99102 2169 aa12.9□□□□□ -0.34
NDUFS3-213ENST00000534716 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
NDUFS3-213ENST00000534716 LYPD5Q6UWN5 251 aa12.89□□□□□ -0.35
NDUFS3-213ENST00000534716 Q6ZRN7 208 aaPredicted RBP12.89□□□□□ -0.35
NDUFS3-213ENST00000534716 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
NDUFS3-213ENST00000534716 NXPH4O95158 308 aa12.88□□□□□ -0.35
NDUFS3-213ENST00000534716 LINC00315P59091 139 aa12.88□□□□□ -0.35
NDUFS3-213ENST00000534716 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
NDUFS3-213ENST00000534716 TMEM183AQ8IXX5 376 aa12.88□□□□□ -0.35
NDUFS3-213ENST00000534716 C8orf49Q96NF6 230 aa12.88□□□□□ -0.35
NDUFS3-213ENST00000534716 RAB2AP61019 212 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 GOLT1AQ6ZVE7 132 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 ZNF479Q96JC4 524 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 KRTAP4-5Q9BYR2 181 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 BATF3Q9NR55 127 aa12.87□□□□□ -0.35
NDUFS3-213ENST00000534716 TRAV21A0A0B4J279 112 aa12.86□□□□□ -0.35
NDUFS3-213ENST00000534716 TRGV4A0A0C4DH28 118 aa12.86□□□□□ -0.35
NDUFS3-213ENST00000534716 TVP23CQ96ET8 276 aa12.86□□□□□ -0.35
NDUFS3-213ENST00000534716 ALG5Q9Y673 324 aa12.86□□□□□ -0.35
NDUFS3-213ENST00000534716 IGHV3-16A0A0C4DH30 117 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 SERTM2A0A1B0GWG4 89 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 K7EP13 123 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 K7EQD1 137 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 ORM1P02763 201 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 SFTA3P0C7M3 94 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 AQP10Q96PS8 301 aa12.85□□□□□ -0.35
NDUFS3-213ENST00000534716 TRAV4A0A0B4J268 109 aa12.84□□□□□ -0.35
NDUFS3-213ENST00000534716 M0R2P5 195 aa12.84□□□□□ -0.35
NDUFS3-213ENST00000534716 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
NDUFS3-213ENST00000534716 TREM1Q9NP99 234 aa12.84□□□□□ -0.35
NDUFS3-213ENST00000534716 RPH3ALQ9UNE2 315 aa12.84□□□□□ -0.35
NDUFS3-213ENST00000534716 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.36
NDUFS3-213ENST00000534716 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
NDUFS3-213ENST00000534716 GNRH2O43555 120 aa12.83□□□□□ -0.36
NDUFS3-213ENST00000534716 PTTG1O95997 202 aa12.83□□□□□ -0.36
NDUFS3-213ENST00000534716 ARL14EPLP0DKL9 152 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms