RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TMBIM4Q9HC24 238 aa2.4□□□□□ -2.03
ECHDC1-223ENST00000534442 R4GMQ9 66 aa2.4□□□□□ -2.03
ECHDC1-223ENST00000534442 HLA-DRB4X5D2U9 266 aa2.4□□□□□ -2.03
ECHDC1-223ENST00000534442 A8MWL6 223 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 IBA57-AS1B1ANH7 110 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 MCRIP1C9JLW8 97 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 ITGB1BP1O14713 200 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 CYB5BO43169 146 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 OR7C2O60412 319 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 DCTN3O75935 186 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 KDELR2P33947 212 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 IFNGR2P38484 337 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 NUDT2P50583 147 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 VSNL1P62760 191 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 MRPS15P82914 257 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 DHRS2Q13268 280 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 CDK10Q15131 360 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 RSU1Q15404 277 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 MAPRE2Q15555 327 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 KISS1Q15726 138 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 RTL8BQ17RB0 113 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 ERICH5Q6P6B1 374 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 PRSS54Q6PEW0 395 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 LYPD5Q6UWN5 251 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 SSX6Q7RTT6 188 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 FUNDC1Q8IVP5 155 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 PXT1Q8NFP0 134 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 TLCD1Q96CP7 247 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 CCDC124Q96CT7 223 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 DERL3Q96Q80 235 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 CGREF1Q99674 301 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 YIPF3Q9GZM5 350 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 NXF2Q9GZY0 626 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 OR51V1Q9H2C8 321 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 SPACA1Q9HBV2 294 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 CCDC167Q9P0B6 97 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 RAB22AQ9UL26 194 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 BAIAP2Q9UQB8 552 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 FAM32AQ9Y421 112 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 TIMM8BQ9Y5J9 83 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 ICOSQ9Y6W8 199 aa2.39□□□□□ -2.03
ECHDC1-223ENST00000534442 ISLRO14498 428 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 GEMIN2O14893 280 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 TCAPO15273 167 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 CDRT1O95170 752 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 RLN2P04090 185 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 PRM2P04554 102 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 CTSGP08311 255 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 NQO2P16083 231 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 SPRR2DP22532 72 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 EIF2B2P49770 351 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 RBM11P57052 281 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 B2MP61769 119 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 TSPAN31Q12999 210 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 TPBGQ13641 420 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 SS18Q15532 418 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 MPV17LQ2QL34 196 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 Q56UQ5 140 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 SLC25A34Q6PIV7 304 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 NEGR1Q7Z3B1 354 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 OR10K1Q8NGX5 313 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 TMEM167AQ8TBQ9 72 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 DEDD2Q8WXF8 326 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 ADAT3Q96EY9 351 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 OR52B2Q96RD2 323 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 SLC35B3Q9H1N7 401 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 IFT46Q9NQC8 304 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 CMC2Q9NRP2 79 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 IL20Q9NYY1 176 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 ABRACLQ9P1F3 81 aa2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-223ENST00000534442 LOC107986453A0A1B0GWG9 222 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 A0A1B0GXF2 115 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 A0A1W2PQL4 384 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 E7EUB6 86 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 PITX3O75364 302 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 SEC11BP0C7V7 166 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 SAA1P0DJI8 122 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 SMIM11AP58511 58 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 TSPAN5P62079 268 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 PSG9Q00887 426 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 BTN1A1Q13410 526 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 KRTAP13-2Q52LG2 175 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 RBM48Q5RL73 367 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 FAM231DQ6ZW35 169 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 AHSA2Q719I0 299 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 TRMT10CQ7L0Y3 403 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 OR8D4Q8NGM9 314 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 OR10AC1Q8NH08 325 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 GNPDA2Q8TDQ7 276 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 BLNKQ8WV28 456 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 ZNF2Q9BSG1 426 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 TSSK6Q9BXA6 273 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 TTTY10Q9BZA0 68 aa2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 NOP10Q9NPE3 64 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-223ENST00000534442 RBM12B-AS1Q9P1G2 102 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms