RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 INSL3P51460 131 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF138P52744 262 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 PMAIP1Q13794 54 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 ANKRD29Q8N6D5 301 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF525Q8N782 197 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 TYMSOSQ8TAI1 123 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 DPH3Q96FX2 82 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 ZC2HC1AQ96GY0 325 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 FMC1Q96HJ9 113 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 MRPL20Q9BYC9 149 aaKnown RBP2.51□□□□□ -2.01
CSMD3-210ENST00000534172 IMUPQ9GZP8 106 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 KCNIP2Q9NS61 270 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 PRR34Q9NV39 138 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 GNG13Q9P2W3 67 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 ANKRD12Q6UB98 2062 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 APCSP02743 223 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 RBP4P02753 201 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 P0C879 139 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 PSMB8P28062 276 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 DGAT2L6Q6ZPD8 337 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 RPS27LQ71UM5 84 aaKnown RBP2.51□□□□□ -2.01
CSMD3-210ENST00000534172 RPS4Y2Q8TD47 263 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 TSKUQ8WUA8 353 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 SLC39A9Q9NUM3 307 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 F11RQ9Y624 299 aaKnown RBP2.51□□□□□ -2.01
CSMD3-210ENST00000534172 KIAA1671Q9BY89 1806 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 PTPRBP23467 1997 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 NUP205Q92621 2012 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 A0A0J9YW62 118 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 OOSP1A8MZH6 123 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 H3BP45 60 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 K7EQS6 105 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 TRACP01848 142 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 RPL38P63173 70 aaKnown RBP2.5□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF117Q03924 483 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 CDK5R1Q15078 307 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 CASC10Q5T4H9 136 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 CFAP126Q5VTH2 177 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 NOXRED1Q6NXP6 359 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 ACP7Q6ZNF0 438 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 Q6ZS49 121 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 RPS19BP1Q86WX3 136 aaKnown RBP2.5□□□□□ -2.01
CSMD3-210ENST00000534172 LAMTOR3Q9UHA4 124 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 BIRC6Q9NR09 4857 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV4A0A0B4J268 109 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 IGKV1-8A0A0C4DH67 115 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 C2orf70A6NJV1 201 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 C8orf87E5RJ46 101 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 KRTAP4-16G5E9R7 235 aaPredicted RBP2.5□□□□□ -2.01
CSMD3-210ENST00000534172 CPSF4O95639 269 aaKnown RBP2.5□□□□□ -2.01
CSMD3-210ENST00000534172 HLA-DQA1P01909 254 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 P0DMU3 169 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 FAM231AP0DMU4 169 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 FAM231CP0DMU5 169 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 IGHV3-43DP0DP04 118 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 FOXA3P55318 350 aaPredicted RBP2.5□□□□□ -2.01
CSMD3-210ENST00000534172 EBI3Q14213 229 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 VMA21Q3ZAQ7 101 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 AAED1Q7RTV5 226 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 SLC25A45Q8N413 288 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF645Q8N7E2 425 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 MYOZ3Q8TDC0 251 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 HIGD1BQ9P298 99 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 PCTPQ9UKL6 214 aa2.5□□□□□ -2.01
CSMD3-210ENST00000534172 KLF13Q9Y2Y9 288 aaPredicted RBP2.5□□□□□ -2.01
CSMD3-210ENST00000534172 XIRP2A4UGR9 3374 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 HEATR5AQ86XA9 2040 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 PLXNA4Q9HCM2 1894 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV8-2A0A0B4J237 113 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 IGHV1-69DA0A0B4J2H0 117 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 MDFIC2A0A1B0GVS7 189 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 ZFP92A6NM28 416 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 CEBPZOSA8MTT3 80 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 A8MWL6 223 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 NDUFC2-KCTD14E9PQ53 114 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 EPPINO95925 133 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 CRYGSP22914 178 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 LOXL1Q08397 574 aaPredicted RBP2.49□□□□□ -2.01
CSMD3-210ENST00000534172 RBMY1FQ15415 496 aaKnown RBP2.49□□□□□ -2.01
CSMD3-210ENST00000534172 MRPL2Q5T653 305 aaKnown RBP2.49□□□□□ -2.01
CSMD3-210ENST00000534172 HES3Q5TGS1 186 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 EBLN2Q6P2I7 272 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 CLEC19AQ6UXS0 136 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF493Q6ZR52 646 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 CEND1Q8N111 149 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 NUP35Q8NFH5 326 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TNFRSF19Q9NS68 423 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 IL36BQ9NZH7 164 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 HILPDAQ9Y5L2 63 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 RELNP78509 3460 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV27A0A087WT01 109 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV13-1A0A0B4J241 112 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 A0A0U1RQV1 116 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TEX50A0A1B0GTY4 177 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 C5orf63A6NC05 138 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 IGLL5B9A064 214 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 F2Z2F3 143 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TRBV12-3P01733 135 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms