RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 RHPN1-AS1Q9BWJ2 59 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 GFRA4Q9GZZ7 299 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 NRN1Q9NPD7 142 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 IGHV4OR15-8A0A075B7B6 117 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 A0A087WW49 117 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 FAM231BA6NCW3 169 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 C5orf52A6NGY3 159 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 HIGD1CA8MV81 97 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 G3V4G9 280 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 LGALS9O00182 355 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 PHOX2AO14813 284 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 HOXD3P31249 432 aaPredicted RBP5.32□□□□□ -1.56
SOX6-215ENST00000533411 ID1P41134 155 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 RPS20P60866 119 aaKnown RBP5.32□□□□□ -1.56
SOX6-215ENST00000533411 RAB4BP61018 213 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 RPL11P62913 178 aaKnown RBP5.32□□□□□ -1.56
SOX6-215ENST00000533411 SMUG1Q53HV7 270 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 TCTEX1D4Q5JR98 221 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
SOX6-215ENST00000533411 TCF24Q7RTU0 167 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 PRR25Q96S07 402 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 GNB1LQ9BYB4 327 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 MRPL18Q9H0U6 180 aaKnown RBP5.32□□□□□ -1.56
SOX6-215ENST00000533411 SMPXQ9UHP9 88 aa5.32□□□□□ -1.56
SOX6-215ENST00000533411 TRAV8-2A0A0B4J237 113 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 TMEM213A2RRL7 107 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 ZNF705FA8MVS1 300 aaPredicted RBP5.31□□□□□ -1.56
SOX6-215ENST00000533411 SOCS3O14543 225 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 OVOL1O14753 267 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 SPINK4O60575 86 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 SH2D1AO60880 128 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 PRB2P02812 416 aaPredicted RBP5.31□□□□□ -1.56
SOX6-215ENST00000533411 S100A8P05109 93 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 S100A2P29034 98 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 CDX1P47902 265 aaPredicted RBP5.31□□□□□ -1.56
SOX6-215ENST00000533411 ZNF138P52744 262 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 SYNJ2BPP57105 145 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 HBBP68871 147 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 IGFL4Q6B9Z1 124 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 LINC00322Q6ZN03 302 aaPredicted RBP5.31□□□□□ -1.56
SOX6-215ENST00000533411 COX8CQ7Z4L0 72 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 NDUFA11Q86Y39 141 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 KLHL30-AS1Q8NEE0 82 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 NUP35Q8NFH5 326 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 OR10J6PQ8NGY7 276 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 DPF1Q92782 380 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 C8orf49Q96NF6 230 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 VGLL1Q99990 258 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 PEMTQ9UBM1 199 aa5.31□□□□□ -1.56
SOX6-215ENST00000533411 A0A1B0GW15 77 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 TMEM189A5PLL7 270 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 PRAC2D3DTV9 90 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 LINC01619G3V211 115 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 PRB4P10163 310 aaPredicted RBP5.3□□□□□ -1.56
SOX6-215ENST00000533411 BEAN1Q3B7T3 259 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 TMEM136Q6ZRR5 245 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 C9orf47Q6ZRZ4 202 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 PGLYRP4Q96LB8 373 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 ASCL2Q99929 193 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 GPR61Q9BZJ8 451 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 LENEPQ9Y5L5 61 aa5.3□□□□□ -1.56
SOX6-215ENST00000533411 NOTCH1P46531 2555 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 IGKV3-7A0A075B6H7 116 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 C2orf70A6NJV1 201 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
SOX6-215ENST00000533411 APCSP02743 223 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 SMIM6P0DI80 62 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 HOXA5P20719 270 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 SNRPD3P62318 126 aaKnown RBP5.29□□□□□ -1.56
SOX6-215ENST00000533411 HIST1H1AQ02539 215 aaPredicted RBP5.29□□□□□ -1.56
SOX6-215ENST00000533411 ERCC8Q13216 396 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 RIGQ13278 110 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 DEFB136Q30KP8 78 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 COA6Q5JTJ3 125 aaKnown RBP5.29□□□□□ -1.56
SOX6-215ENST00000533411 SAMD5Q5TGI4 173 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 C18orf65Q6ZTR6 163 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 DYNLRB2Q8TF09 96 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 C20orf173Q96LM9 149 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 PPP1R14DQ9NXH3 145 aa5.29□□□□□ -1.56
SOX6-215ENST00000533411 TRBV7-9A0A0J9YWB2 115 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 A0A1B0GUT8 65 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 FABP5P3A8MUU1 101 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 GZMBP10144 247 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 IGLL1P15814 213 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 CRISP2P16562 243 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 CTRLP40313 264 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 CAMPP49913 170 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 SLURP1P55000 103 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 PAFAH1B2P68402 229 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 KLF5Q13887 457 aaPredicted RBP5.28□□□□□ -1.56
SOX6-215ENST00000533411 ODF1Q14990 250 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 PDZD11Q5EBL8 140 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 OR8A1Q8NGG7 326 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 OR1N2Q8NGR9 330 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 GTSF1Q8WW33 167 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 LINC00477Q96M19 166 aa5.28□□□□□ -1.56
SOX6-215ENST00000533411 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms