RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RNASE8Q8TDE3 154 aaKnown RBP8.57□□□□□ -1.04
SSBP3-214ENST00000533209 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
SSBP3-214ENST00000533209 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
SSBP3-214ENST00000533209 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
SSBP3-214ENST00000533209 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
SSBP3-214ENST00000533209 PEX7O00628 323 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 ATP5G3P48201 142 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 FLI1Q01543 452 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-214ENST00000533209 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 CST9LP1Q5W188 147 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 Q6AWC8 147 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 ALKAL2Q6UX46 152 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 TMEM75Q8N9X5 138 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
SSBP3-214ENST00000533209 PHLDA1Q8WV24 401 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-214ENST00000533209 HIST1H2BAQ96A08 127 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 C16orf74Q96GX8 76 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 LINC00479Q96M42 142 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 PSG8Q9UQ74 426 aa8.56□□□□□ -1.04
SSBP3-214ENST00000533209 TRAV34A0A0B4J273 112 aa8.55□□□□□ -1.04
SSBP3-214ENST00000533209 F6UZH7 168 aa8.55□□□□□ -1.04
SSBP3-214ENST00000533209 PPT1P50897 306 aa8.55□□□□□ -1.04
SSBP3-214ENST00000533209 CEMP1Q6PRD7 247 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-214ENST00000533209 Q6ZTC4 211 aa8.55□□□□□ -1.04
SSBP3-214ENST00000533209 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
SSBP3-214ENST00000533209 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
SSBP3-214ENST00000533209 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 TEX48A0A1B0GUV7 120 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 FBLL1A6NHQ2 334 aaKnown RBP8.54□□□□□ -1.04
SSBP3-214ENST00000533209 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 ANXA2RQ3ZCQ2 193 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 PRNTQ86SH4 94 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 EIF4E3Q8N5X7 224 aaKnown RBP8.54□□□□□ -1.04
SSBP3-214ENST00000533209 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 TCEAL7Q9BRU2 100 aa8.54□□□□□ -1.04
SSBP3-214ENST00000533209 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
SSBP3-214ENST00000533209 TEX46H3BTG2 121 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 RGS13O14921 159 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 Q86TA4 180 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 C11orf72Q8NBR9 251 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 NDFIP1Q9BT67 221 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 MANBALQ9NQG1 85 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 GNG13Q9P2W3 67 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 KLF12Q9Y4X4 402 aa8.53□□□□□ -1.04
SSBP3-214ENST00000533209 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-214ENST00000533209 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
SSBP3-214ENST00000533209 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 CBY3A6NI87 242 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 C11orf94C9JXX5 98 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-214ENST00000533209 DAD1P61803 113 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 MUC21Q5SSG8 566 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 SAPCD1Q5SSQ6 148 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 C2CD4CQ8TF44 421 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
SSBP3-214ENST00000533209 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.05
SSBP3-214ENST00000533209 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 TRBV6-1A0A0K0K1D8 114 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 GCGP01275 180 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 AKR1C3P42330 323 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 BLOC1S1P78537 153 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 TDRG1Q3Y452 100 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 SMUG1Q53HV7 270 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 ZNF680Q8NEM1 530 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 GSN-AS1Q9NRJ2 163 aa8.51□□□□□ -1.05
SSBP3-214ENST00000533209 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
SSBP3-214ENST00000533209 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 SNURFLB1AK76 121 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 LTAP01374 205 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 DEFB130BP0DP73 79 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 DEFB130AP0DP74 79 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 TCL1AP56279 114 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 UBE2G1P62253 170 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
SSBP3-214ENST00000533209 TMEM183BQ1AE95 376 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 IBA57Q5T440 356 aaKnown RBP8.5□□□□□ -1.05
SSBP3-214ENST00000533209 FAM159AQ6UWV7 190 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 COX8CQ7Z4L0 72 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 C11orf52Q96A22 123 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
SSBP3-214ENST00000533209 IFNA1P01562 189 aa8.49□□□□□ -1.05
SSBP3-214ENST00000533209 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
SSBP3-214ENST00000533209 BCL2P10415 239 aa8.49□□□□□ -1.05
SSBP3-214ENST00000533209 TMEM183AQ8IXX5 376 aa8.49□□□□□ -1.05
SSBP3-214ENST00000533209 LYPD6BQ8NI32 183 aa8.49□□□□□ -1.05
SSBP3-214ENST00000533209 ZC2HC1AQ96GY0 325 aa8.49□□□□□ -1.05
SSBP3-214ENST00000533209 NAGKQ9UJ70 344 aa8.49□□□□□ -1.05
SSBP3-214ENST00000533209 SACSQ9NZJ4 4579 aa8.48□□□□□ -1.05
SSBP3-214ENST00000533209 GNRH2O43555 120 aa8.48□□□□□ -1.05
SSBP3-214ENST00000533209 S100A9P06702 114 aaKnown RBP8.48□□□□□ -1.05
SSBP3-214ENST00000533209 CRIP1P50238 77 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms