RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 IGKV2-40A0A087WW87 121 aaPredicted RBP7.78□□□□□ -1.16
CMTM1-216ENST00000533078 TRAV8-6A0A0B4J262 113 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 IGHV3-38A0A0C4DH36 116 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 UBE2L5PA0A1B0GUS4 154 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 IGKV2D-40P01614 121 aaPredicted RBP7.78□□□□□ -1.16
CMTM1-216ENST00000533078 MBPP02686 304 aaPredicted RBP7.78□□□□□ -1.16
CMTM1-216ENST00000533078 C1QBP02746 253 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 SFTA3P0C7M3 94 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 CSN1S1P47710 185 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 ZNF138P52744 262 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 HBG1P69891 147 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 HBG2P69892 147 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 SPANXN2Q5MJ10 180 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 FAM122CQ6P4D5 195 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 STX12Q86Y82 276 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 EXOC3-AS1Q8N2X6 119 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 Q8N814 137 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 DEFB104AQ8WTQ1 72 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 SPXQ9BT56 116 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 ZNF492Q9P255 531 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 LSM5Q9Y4Y9 91 aaKnown RBP7.78□□□□□ -1.16
CMTM1-216ENST00000533078 V9GYH0 126 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 TRBV7-9A0A0J9YWB2 115 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 FAM25EA8MYX2 175 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 CST7O76096 145 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 S100A11P31949 105 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 ZFAND2AQ8N6M9 145 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 ZNF479Q96JC4 524 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 TM2D2Q9BX73 214 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 Q9HAA7 133 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 FLVCR2Q9UPI3 526 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 WDR83OSQ9Y284 106 aa7.77□□□□□ -1.17
CMTM1-216ENST00000533078 TRAV4A0A0B4J268 109 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
CMTM1-216ENST00000533078 NDUFB4O95168 129 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 PYYP10082 97 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 FGF7P21781 194 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 LINC01556Q5JQF7 62 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 MUC21Q5SSG8 566 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 MITD1Q8WV92 249 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 RASL10AQ92737 203 aa7.76□□□□□ -1.17
CMTM1-216ENST00000533078 LRCOL1A6NCL2 159 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 C5orf51A6NDU8 294 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 IBA57-AS1B1ANH7 110 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
CMTM1-216ENST00000533078 NBEAP1P0C6P0 100 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 TIRAPP58753 221 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 TMEM183BQ1AE95 376 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 TDRG1Q3Y452 100 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 PRR9Q5T870 116 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 TMEM183AQ8IXX5 376 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 LINC00528Q8N1L1 170 aa7.75□□□□□ -1.17
CMTM1-216ENST00000533078 SULT1A1P50225 295 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 S100A10P60903 97 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 ZNF266Q14584 549 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 BAK1Q16611 211 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 ATP6V1FQ16864 119 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 VWC2Q2TAL6 325 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 Q8TAT8 98 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 ATP5SQ99766 215 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 SH3BGRL3Q9H299 93 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 KCNIP2Q9NS61 270 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 NAGKQ9UJ70 344 aa7.74□□□□□ -1.17
CMTM1-216ENST00000533078 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 RBAKDNA6NC62 111 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 FAM24AA6NFZ4 105 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 M0R2P5 195 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 CCSO14618 274 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 LAGE3Q14657 143 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 CHAC2Q8WUX2 184 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 S100ZQ8WXG8 99 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 PRADC1Q9BSG0 188 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 PAXXQ9BUH6 204 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 SLC25A2Q9BXI2 301 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 OR51M1Q9H341 326 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 LYRM2Q9NU23 88 aaPredicted RBP7.73□□□□□ -1.17
CMTM1-216ENST00000533078 LENEPQ9Y5L5 61 aa7.73□□□□□ -1.17
CMTM1-216ENST00000533078 LRP1Q07954 4544 aaKnown RBP7.72□□□□□ -1.17
CMTM1-216ENST00000533078 Q6ZQT7 251 aa7.72□□□□□ -1.17
CMTM1-216ENST00000533078 NPCDR1Q9BY65 106 aa7.72□□□□□ -1.17
CMTM1-216ENST00000533078 FAM30AQ9NZY2 134 aa7.72□□□□□ -1.17
CMTM1-216ENST00000533078 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
CMTM1-216ENST00000533078 OR7C2O60412 319 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 CIDEAO60543 219 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 IGHV3-33P01772 117 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 RHOHQ15669 191 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 Q6AWC8 147 aa7.71□□□□□ -1.18
CMTM1-216ENST00000533078 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
CMTM1-216ENST00000533078 IGHV3-16A0A0C4DH30 117 aa7.7□□□□□ -1.18
CMTM1-216ENST00000533078 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
CMTM1-216ENST00000533078 OR10J4P0C629 311 aa7.7□□□□□ -1.18
CMTM1-216ENST00000533078 GATA1P15976 413 aaPredicted RBP7.7□□□□□ -1.18
CMTM1-216ENST00000533078 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms