RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 COX8AP10176 69 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 PKD1L2Q7Z442 2459 aa11.42□□□□□ -0.58
SSH3-210ENST00000532881 NMUP48645 174 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 IFI27L1Q96BM0 104 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 TRAV40A0A0B4J280 105 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 SMAD7O15105 426 aaKnown RBP11.41□□□□□ -0.58
SSH3-210ENST00000532881 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 FGF6P10767 208 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 LEPP41159 167 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 UCNP55089 124 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 KIR3DS1Q14943 382 aa11.41□□□□□ -0.58
SSH3-210ENST00000532881 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
SSH3-210ENST00000532881 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
SSH3-210ENST00000532881 ITLN2Q8WWU7 325 aaPredicted RBP11.4□□□□□ -0.58
SSH3-210ENST00000532881 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.58
SSH3-210ENST00000532881 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
SSH3-210ENST00000532881 EDN2P20800 178 aa11.4□□□□□ -0.58
SSH3-210ENST00000532881 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
SSH3-210ENST00000532881 F6UB75 175 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 OR4C5Q8NGB2 326 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 PIFOQ8TCI5 191 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 MS4A6AQ9H2W1 248 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 K7EMI3 77 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 K7EP13 123 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 SRD5A1P18405 259 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 WFDC12Q8WWY7 111 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 EEF1AKMT3Q96AZ1 226 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 KLK15Q9H2R5 256 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 POLQO75417 2590 aa11.39□□□□□ -0.59
SSH3-210ENST00000532881 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 IGHV4-61A0A0C4DH41 118 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 FBLL1A6NHQ2 334 aaKnown RBP11.38□□□□□ -0.59
SSH3-210ENST00000532881 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
SSH3-210ENST00000532881 METTL26Q96S19 204 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 SCGB2A1O75556 95 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 ATP5G2Q06055 141 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
SSH3-210ENST00000532881 TRAV41A0A0B4J266 112 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 IGHV7-4-1A0A0J9YVY3 117 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 H3BVH4 76 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
SSH3-210ENST00000532881 BLCAPP62952 87 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 TMEM158Q8WZ71 300 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 USP9XQ93008 2570 aaPredicted RBP11.37□□□□□ -0.59
SSH3-210ENST00000532881 RPS20P60866 119 aaKnown RBP11.37□□□□□ -0.59
SSH3-210ENST00000532881 C12orf54Q6X4T0 127 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 RAB37Q96AX2 223 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
SSH3-210ENST00000532881 PRSS1P07477 247 aa11.36□□□□□ -0.59
SSH3-210ENST00000532881 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
SSH3-210ENST00000532881 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
SSH3-210ENST00000532881 NRGNQ92686 78 aa11.36□□□□□ -0.59
SSH3-210ENST00000532881 C7orf71A4D174 169 aa11.35□□□□□ -0.59
SSH3-210ENST00000532881 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
SSH3-210ENST00000532881 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
SSH3-210ENST00000532881 ARL3P36405 182 aa11.35□□□□□ -0.59
SSH3-210ENST00000532881 RNF151Q2KHN1 245 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 SLC50A1Q9BRV3 221 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 M0R381 172 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 TMEM95Q3KNT9 176 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 SPANXN1Q5VSR9 72 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 FOXC2Q99958 501 aa11.34□□□□□ -0.59
SSH3-210ENST00000532881 USP9YO00507 2555 aaPredicted RBP11.34□□□□□ -0.59
SSH3-210ENST00000532881 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
SSH3-210ENST00000532881 IGSF10Q6WRI0 2623 aa11.33□□□□□ -0.6
SSH3-210ENST00000532881 H3BUX3 64 aa11.33□□□□□ -0.6
SSH3-210ENST00000532881 OR2K2Q8NGT1 345 aa11.33□□□□□ -0.6
SSH3-210ENST00000532881 ODF1Q14990 250 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 SORL1Q92673 2214 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 PIEZO1Q92508 2521 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 IGHV1-69DA0A0B4J2H0 117 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 CD5LO43866 347 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 IGHV1-69P01742 117 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 RBX1P62877 108 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 JMJD8Q96S16 334 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 HHLA3Q9XRX5 114 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 U3KQE9 123 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 FBN2P35556 2912 aa11.32□□□□□ -0.6
SSH3-210ENST00000532881 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 PF4V1P10720 104 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 FCER1GP30273 86 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 NRACQ8N912 160 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 TMEM160Q9NX00 188 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 GNRH2O43555 120 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms