RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TMEM189A5PLL7 270 aa17.79■□□□□ 0.44
USP48-214ENST00000532737 PEX7O00628 323 aa17.79■□□□□ 0.44
USP48-214ENST00000532737 NANOS2P60321 138 aaKnown RBP17.79■□□□□ 0.44
USP48-214ENST00000532737 CELA1Q9UNI1 258 aa17.79■□□□□ 0.44
USP48-214ENST00000532737 PSG8Q9UQ74 426 aa17.79■□□□□ 0.44
USP48-214ENST00000532737 PPT1P50897 306 aa17.78■□□□□ 0.44
USP48-214ENST00000532737 TRAV34A0A0B4J273 112 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 CXorf65A6NEN9 183 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 FLI1Q01543 452 aaPredicted RBP17.77■□□□□ 0.44
USP48-214ENST00000532737 TMEM75Q8N9X5 138 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 HIST1H2BAQ96A08 127 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 PYGO2Q9BRQ0 406 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 TREM1Q9NP99 234 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 GNG13Q9P2W3 67 aa17.77■□□□□ 0.44
USP48-214ENST00000532737 PLAC8L1A1L4L8 177 aa17.76■□□□□ 0.43
USP48-214ENST00000532737 TEX46H3BTG2 121 aa17.76■□□□□ 0.43
USP48-214ENST00000532737 PMS2P11Q13670 270 aa17.76■□□□□ 0.43
USP48-214ENST00000532737 PRNTQ86SH4 94 aa17.76■□□□□ 0.43
USP48-214ENST00000532737 SACSQ9NZJ4 4579 aa17.74■□□□□ 0.43
USP48-214ENST00000532737 FBLL1A6NHQ2 334 aaKnown RBP17.74■□□□□ 0.43
USP48-214ENST00000532737 F6UZH7 168 aa17.74■□□□□ 0.43
USP48-214ENST00000532737 RNASE8Q8TDE3 154 aaKnown RBP17.74■□□□□ 0.43
USP48-214ENST00000532737 LINC00467Q9BRT7 94 aa17.74■□□□□ 0.43
USP48-214ENST00000532737 TCEAL7Q9BRU2 100 aa17.74■□□□□ 0.43
USP48-214ENST00000532737 NDFIP1Q9BT67 221 aa17.74■□□□□ 0.43
USP48-214ENST00000532737 DKK2Q9UBU2 259 aa17.74■□□□□ 0.43
USP48-214ENST00000532737 SPART-AS1P0CW21 52 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 C12orf74Q32Q52 190 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 FAM222AQ5U5X8 452 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 Q6AWC8 147 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 ZNF493Q6ZR52 646 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 ZNF767PQ75MW2 155 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 C8orf49Q96NF6 230 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 MANBALQ9NQG1 85 aa17.73■□□□□ 0.43
USP48-214ENST00000532737 C11orf94C9JXX5 98 aa17.72■□□□□ 0.43
USP48-214ENST00000532737 TMEM263Q8WUH6 116 aaKnown RBP17.72■□□□□ 0.43
USP48-214ENST00000532737 C16orf74Q96GX8 76 aa17.72■□□□□ 0.43
USP48-214ENST00000532737 KLF12Q9Y4X4 402 aa17.72■□□□□ 0.43
USP48-214ENST00000532737 RGS13O14921 159 aa17.71■□□□□ 0.43
USP48-214ENST00000532737 BLOC1S1P78537 153 aa17.71■□□□□ 0.43
USP48-214ENST00000532737 EIF4E3Q8N5X7 224 aaKnown RBP17.71■□□□□ 0.43
USP48-214ENST00000532737 IGHV1OR15-1A0A075B7D0 117 aa17.7■□□□□ 0.42
USP48-214ENST00000532737 SCO2A0A1W2PP80 73 aa17.7■□□□□ 0.42
USP48-214ENST00000532737 ZNF80P51504 273 aaPredicted RBP17.7■□□□□ 0.42
USP48-214ENST00000532737 MUC21Q5SSG8 566 aa17.7■□□□□ 0.42
USP48-214ENST00000532737 SAPCD1Q5SSQ6 148 aa17.7■□□□□ 0.42
USP48-214ENST00000532737 Q86TA4 180 aa17.7■□□□□ 0.42
USP48-214ENST00000532737 PHLDA1Q8WV24 401 aaPredicted RBP17.7■□□□□ 0.42
USP48-214ENST00000532737 CSMD3Q7Z407 3707 aa17.7■□□□□ 0.42
USP48-214ENST00000532737 CBY3A6NI87 242 aa17.69■□□□□ 0.42
USP48-214ENST00000532737 AKR1C3P42330 323 aa17.69■□□□□ 0.42
USP48-214ENST00000532737 ANXA2RQ3ZCQ2 193 aa17.69■□□□□ 0.42
USP48-214ENST00000532737 Q6ZTC4 211 aa17.69■□□□□ 0.42
USP48-214ENST00000532737 C2CD4CQ8TF44 421 aa17.69■□□□□ 0.42
USP48-214ENST00000532737 TP53TG3Q9ULZ0 132 aa17.69■□□□□ 0.42
USP48-214ENST00000532737 CEMP1Q6PRD7 247 aaPredicted RBP17.68■□□□□ 0.42
USP48-214ENST00000532737 FMC1Q96HJ9 113 aa17.68■□□□□ 0.42
USP48-214ENST00000532737 LYSTQ99698 3801 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 TRAV21A0A0B4J279 112 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 TRBV6-1A0A0K0K1D8 114 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 TEX48A0A1B0GUV7 120 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 LYRM9A8MSI8 78 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 GCGP01275 180 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 IFNA1P01562 189 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 UBE2G1P62253 170 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 TMEM183BQ1AE95 376 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 SMUG1Q53HV7 270 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 NOP10Q9NPE3 64 aaKnown RBP17.67■□□□□ 0.42
USP48-214ENST00000532737 TIMM8BQ9Y5J9 83 aaPredicted RBP17.67■□□□□ 0.42
USP48-214ENST00000532737 STARD9Q9P2P6 4700 aa17.67■□□□□ 0.42
USP48-214ENST00000532737 BCL2P10415 239 aa17.66■□□□□ 0.42
USP48-214ENST00000532737 C11orf72Q8NBR9 251 aa17.66■□□□□ 0.42
USP48-214ENST00000532737 LYPD6BQ8NI32 183 aa17.66■□□□□ 0.42
USP48-214ENST00000532737 GSN-AS1Q9NRJ2 163 aa17.66■□□□□ 0.42
USP48-214ENST00000532737 TEX261Q6UWH6 196 aa17.65■□□□□ 0.42
USP48-214ENST00000532737 ZNF680Q8NEM1 530 aa17.65■□□□□ 0.42
USP48-214ENST00000532737 TXNDC17Q9BRA2 123 aa17.65■□□□□ 0.42
USP48-214ENST00000532737 NAGKQ9UJ70 344 aa17.65■□□□□ 0.42
USP48-214ENST00000532737 ZFP30Q9Y2G7 519 aa17.65■□□□□ 0.42
USP48-214ENST00000532737 LCE6AA0A183 80 aa17.64■□□□□ 0.41
USP48-214ENST00000532737 NUPR2A6NF83 97 aa17.64■□□□□ 0.41
USP48-214ENST00000532737 MEF2BQ02080 365 aaPredicted RBP17.64■□□□□ 0.41
USP48-214ENST00000532737 FAM159AQ6UWV7 190 aa17.64■□□□□ 0.41
USP48-214ENST00000532737 C11orf52Q96A22 123 aa17.64■□□□□ 0.41
USP48-214ENST00000532737 C11orf21Q9P2W6 132 aa17.64■□□□□ 0.41
USP48-214ENST00000532737 VAX2Q9UIW0 290 aa17.64■□□□□ 0.41
USP48-214ENST00000532737 DNAH1Q9P2D7 4330 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 SNURFLB1AK76 121 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 LTAP01374 205 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 DEFB130BP0DP73 79 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 DEFB130AP0DP74 79 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 DAD1P61803 113 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 TDRG1Q3Y452 100 aa17.63■□□□□ 0.41
USP48-214ENST00000532737 TRAV10A0A0B4J240 114 aa17.62■□□□□ 0.41
USP48-214ENST00000532737 S100A9P06702 114 aaKnown RBP17.62■□□□□ 0.41
USP48-214ENST00000532737 PFN1P07737 140 aaKnown RBP17.62■□□□□ 0.41
USP48-214ENST00000532737 DAZ2Q13117 558 aaKnown RBP17.62■□□□□ 0.41
USP48-214ENST00000532737 COX8CQ7Z4L0 72 aa17.62■□□□□ 0.41
USP48-214ENST00000532737 ZC2HC1AQ96GY0 325 aa17.62■□□□□ 0.41
USP48-214ENST00000532737 GNRH2O43555 120 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms