RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 ADORA2A-AS1P86434 159 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 RNF138Q8WVD3 245 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 TMEM242Q9NWH2 141 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 TRAV13-2A0A0B4J235 113 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 IGHV2-5P01817 119 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 SPANXDQ9BXN6 97 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 TP53TG1Q9Y2A0 90 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.97□□□□□ -1.299e-7■■■□□ 18
CTNND1-232ENST00000532649 IGHV1-24A0A0C4DH33 117 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 NDUFB8O95169 186 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 IFITM1P13164 125 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 DEFB113Q30KQ7 82 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 TMEM14BQ9NUH8 114 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 C15orf65H3BRN8 121 aa6.96□□□□□ -1.29
CTNND1-232ENST00000532649 LINC00311Q8N616 119 aa6.96□□□□□ -1.29
CTNND1-232ENST00000532649 IGHV1OR15-1A0A075B7D0 117 aa6.96□□□□□ -1.29
CTNND1-232ENST00000532649 BAALCQ8WXS3 180 aa6.96□□□□□ -1.29
CTNND1-232ENST00000532649 KAAG1Q9UBP8 84 aa6.96□□□□□ -1.29
CTNND1-232ENST00000532649 DOCK10Q96BY6 2186 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV2-70P01814 119 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 OBSL1O75147 1896 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 FAM208BQ5VWN6 2430 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV3-38A0A0C4DH36 116 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 IGLV3-1P01715 115 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 DIAPH2-AS1Q14236 149 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 POU2AF1Q16633 256 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 NDUFA4L2Q9NRX3 87 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 TRBV20-1A0A075B6N2 111 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 CRYGCP07315 174 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 C9orf66Q5T8R8 295 aa6.96□□□□□ -1.3
CTNND1-232ENST00000532649 KLF2Q9Y5W3 355 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-232ENST00000532649 IGKV1-39P01597 117 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 IGKV1D-39P04432 117 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 FAM120AOSQ5T036 256 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 A0A0J9YY99 117 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 SMKR1H3BMG3 65 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 TPSG1Q9NRR2 321 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 CTSZQ9UBR2 303 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-232ENST00000532649 FNDC10F2Z333 226 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 ZNF134P52741 427 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 KIR3DS1Q14943 382 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 STPG4Q8N801 248 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 HLA-DRB4P13762 266 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 UBE2V1Q13404 147 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 ATRAIDQ6UW56 229 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 WFDC9Q8NEX5 89 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 SHANK2-AS3Q9BTD1 123 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 HLA-DRB4X5D2U9 266 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-232ENST00000532649 BUB3O43684 328 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 ARMS2P0C7Q2 107 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-232ENST00000532649 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
CTNND1-232ENST00000532649 PLA2G5P39877 138 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 SPRNQ5BIV9 151 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 ATP6V0BQ99437 205 aa6.95□□□□□ -1.3
CTNND1-232ENST00000532649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-232ENST00000532649 PFN1P07737 140 aaKnown RBP6.94□□□□□ -1.3
CTNND1-232ENST00000532649 HERVK_113P63121 156 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 NRGNQ92686 78 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 FANCD2OSQ96PS1 177 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 C8orf31Q8N9H6 132 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV4-30-2A0A087WSY4 118 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 A0A087X0K7 114 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 SPANXCQ9NY87 97 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV4-61A0A0C4DH41 118 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 RHOHQ15669 191 aa6.94□□□□□ -1.3
CTNND1-232ENST00000532649 UBE2CO00762 179 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 ICOSQ9Y6W8 199 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 MED13LQ71F56 2210 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 PRR31Q5SQ13 230 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 C11orf53Q8IXP5 236 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 NUP35Q8NFH5 326 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 MRPL36Q9P0J6 103 aaKnown RBP6.93□□□□□ -1.3
CTNND1-232ENST00000532649 Q6ZQT7 251 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 SEM1Q6ZVN7 128 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 CDKN1BP46527 198 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 YPEL3P61236 119 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-232ENST00000532649 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 MALRD1Q5VYJ5 2156 aa6.93□□□□□ -1.3
CTNND1-232ENST00000532649 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 MP68P56378 58 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 PTPRQQ9UMZ3 2332 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 A0A1B0GUS0 222 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 LYL1P12980 280 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV4-4A0A075B6R2 117 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 IGLV2-23P01705 113 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 XCL1P47992 114 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 Q8NA96 180 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms