RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ZNF688P0C7X2 276 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 CGB3P0DN86 165 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 CGB7P0DN87 165 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 RNASE4P34096 147 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 ASIPP42127 132 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 CAV3P56539 151 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 SMIM11AP58511 58 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 SPRNQ5BIV9 151 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 FAM72AQ5TYM5 149 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 FAM72DQ6L9T8 149 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 FAM72BQ86X60 149 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 SIGLECL1Q8N7X8 197 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 APCDD1LQ8NCL9 501 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 CACNA1IQ9P0X4 2223 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 BPTFQ12830 3046 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 IGLV1-44P01699 117 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 FAUP35544 74 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 SSBP1Q04837 148 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 IGFBP7Q16270 282 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 ZNF525Q8N782 197 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 C3orf56Q8N813 242 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 RAB37Q96AX2 223 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 C1orf147Q96MC9 270 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 AQP10Q96PS8 301 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 PLA2G2FQ9BZM2 168 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 CYTL1Q9NRR1 136 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 RABAC1Q9UI14 185 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 EPDR1Q9UM22 224 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 TDRD6O60522 2096 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 NINQ8N4C6 2090 aa3.67□□□□□ -1.82
ECHDC1-222ENST00000531967 C3orf85A0A1B0GTC6 90 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 LEPROTO15243 131 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 APCSP02743 223 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 CD3DP04234 171 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 IGHV1-8P0DP01 117 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 WFDC2Q14508 124 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 FAM78AQ5JUQ0 283 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 C18orf65Q6ZTR6 163 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 Q8N377 158 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 MORN4Q8NDC4 146 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 LINC01006Q8NI28 216 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 CHCHD7Q9BUK0 85 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 CXCL16Q9H2A7 254 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 NAA60Q9H7X0 242 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 POLEQ07864 2286 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 TRBV6-7A0A0A0MS04 114 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 SYS1-DBNDD2H3BUS1 97 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 J3QRE1 110 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 ZNF737O75373 536 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 IGKV1-16P04430 117 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 CRYGAP11844 174 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 RPL18Q07020 188 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 ZNF322Q6U7Q0 402 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 C9orf47Q6ZRZ4 202 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 CST11Q9H112 138 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 GOLGA2P5Q9HBQ8 144 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 MANBALQ9NQG1 85 aa3.66□□□□□ -1.82
ECHDC1-222ENST00000531967 IGLV3-10A0A075B6K4 115 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 A0A1B0GUV1 79 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 A0A1B0GVX0 72 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 BPY2O14599 106 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 NDUFB2O95178 105 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 TRACP01848 142 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 CD28P10747 220 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 MRPL51Q4U2R6 128 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 Q56UQ5 140 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 SH2D6Q7Z4S9 175 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 BPIFA4PQ86YQ2 179 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 NPCDR1Q9BY65 106 aa3.65□□□□□ -1.82
ECHDC1-222ENST00000531967 TRAV12-2A0A075B6T6 113 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 LOC107986453A0A1B0GWG9 222 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 SCO2A0A1W2PP80 73 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 ZNF883P0CG24 379 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 MDKP21741 143 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 NPPCP23582 126 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 HLA-DMBP28068 263 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 SNRPD3P62318 126 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 ZFAND2AQ8N6M9 145 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 FAM213BQ8TBF2 198 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 PPDPFLQ8WWR9 84 aa3.65□□□□□ -1.83
ECHDC1-222ENST00000531967 IGLV11-55A0A075B6I3 123 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 IGHV3-21A0A0B4J1V1 117 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 SYNGR2O43760 224 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 INSP01308 110 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 TMEM155Q4W5P6 130 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 AMN1Q8IY45 258 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 CYB561D1Q8N8Q1 229 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 RPP21Q9H633 154 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 OSTCQ9NRP0 149 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 Q9Y3F1 56 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 LINC00588Q9Y4M8 146 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 PLXNA2O75051 1894 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 OBSL1O75147 1896 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 CASP8AP2Q9UKL3 1982 aa3.64□□□□□ -1.83
ECHDC1-222ENST00000531967 K7ERS5 55 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms