RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 IGHV3-33P01772 117 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 Q56UQ5 140 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 MALRD1Q5VYJ5 2156 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 TEX261Q6UWH6 196 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 C3orf62Q6ZUJ4 267 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 SNX29P2Q8IUI4 249 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 TTTY12Q9BZ98 90 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 SERP1Q9Y6X1 66 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 MYH10P35580 1976 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 GREB1Q4ZG55 1949 aa2.21□□□□□ -2.06
AC055878.1-201ENST00000531858 NOTCH2Q04721 2471 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 IGKV1-17P01599 117 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 COX7CP15954 63 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 ADCYAP1P18509 176 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 SLC25A26Q70HW3 274 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 CLECL1Q8IZS7 167 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 Q8TAT8 98 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 TXNDC17Q9BRA2 123 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 MAPKBP1O60336 1514 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 KTN1Q86UP2 1357 aaKnown RBP2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 PXDNLA1KZ92 1463 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 COL4A2P08572 1712 aa2.2□□□□□ -2.06
AC055878.1-201ENST00000531858 IGKV1D-17A0A075B6S4 117 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 SPAARA0A1B0GVQ0 90 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 TMEM218A2RU14 115 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 CCDC179H3BU77 68 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 SNAPC5O75971 98 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 IFNA17P01571 189 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 PRB2P02812 416 aaPredicted RBP2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 KRTAP10-3P60369 221 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 C12orf73Q69YU5 71 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 Q6AWC8 147 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 OR2T2Q6IF00 324 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 GTF2H5Q6ZYL4 71 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 DYNLRB2Q8TF09 96 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 PPDPFLQ8WWR9 84 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 PATE1Q8WXA2 126 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 ORMDL1Q9P0S3 153 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 PHLPP1O60346 1717 aa2.19□□□□□ -2.06
AC055878.1-201ENST00000531858 ADGRB3O60242 1522 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 TP53BP1Q12888 1972 aaPredicted RBP2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 TRAV30A0A087WSZ9 112 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 LOC107984156A0A0G2JMH3 177 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 APOC4-APOC2K7ER74 178 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 M0R129 80 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 APOC2P02655 101 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 C10orf55Q5SWW7 151 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 MIC13Q5XKP0 118 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 GKN2Q86XP6 184 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 ARL17AQ8IVW1 177 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 PLPP5Q8NEB5 264 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 SEC11CQ9BY50 192 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 CCDC88CQ9P219 2028 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 CPAMD8Q8IZJ3 1885 aa2.18□□□□□ -2.06
AC055878.1-201ENST00000531858 MCRIP1C9JLW8 97 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 GEMIN2O14893 280 aaKnown RBP2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 CCL16O15467 120 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 PIPP12273 146 aaPredicted RBP2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 SPANXN1Q5VSR9 72 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 LINC00299Q6ZSB3 139 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 ZCCHC23Q6ZST2 131 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 FP248Q71RG6 208 aaPredicted RBP2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 C5orf17Q8NAS9 161 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 LINC00052Q96N35 136 aa2.17□□□□□ -2.06
AC055878.1-201ENST00000531858 USP54Q70EL1 1684 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 ADAMTS7Q9UKP4 1686 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 PZPP20742 1482 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 PIGBOS1A0A0B4J2F0 54 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 F8W1H4 67 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 KLF7O75840 302 aaPredicted RBP2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 NDUFB6O95139 128 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 HSD52Q0P140 79 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 SPTSSAQ969W0 71 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 MRPL57Q9BQC6 102 aaKnown RBP2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 ZSWIM8A7E2V4 1837 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 DAPK1P53355 1430 aa2.16□□□□□ -2.06
AC055878.1-201ENST00000531858 A0A1W2PRS3 328 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 RHOHQ15669 191 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 FAM74A1Q5RGS3 127 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 MRPL54Q6P161 138 aaKnown RBP2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 NDUFA11Q86Y39 141 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 LINC00526Q96FQ7 95 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 CDK5RAP2Q96SN8 1893 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 ZNF609O15014 1411 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 FANCMQ8IYD8 2048 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 TRPM6Q9BX84 2022 aa2.15□□□□□ -2.07
AC055878.1-201ENST00000531858 ZFYVE16Q7Z3T8 1539 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 TRBV6-8A0A0A6YYG3 113 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 A0A0J9YY99 117 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 M0R143 59 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 CCL25O15444 150 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 NUPR1O60356 82 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 IL5P05113 134 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 RNASE3P12724 160 aaKnown RBP2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 PKIAP61925 76 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 Q6ZS92 163 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 TMEM242Q9NWH2 141 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 COL4A5P29400 1685 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms