RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 CRISP2P16562 243 aa12.77□□□□□ -0.37
PTPN11-204ENST00000531326 TSPOP30536 169 aa12.77□□□□□ -0.37
PTPN11-204ENST00000531326 ATP5G3P48201 142 aa12.77□□□□□ -0.37
PTPN11-204ENST00000531326 SERTM2A0A1B0GWG4 89 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 KLLNB2CW77 178 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 PPT1P50897 306 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 CST9LP1Q5W188 147 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 ATG101Q9BSB4 218 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
PTPN11-204ENST00000531326 DEFB131BA0A096LNP1 70 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 TRBV7-9A0A0J9YWB2 115 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 A0A1B0GVY2 172 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 TEX46H3BTG2 121 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 J3KRW8 73 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 IFNA7P01567 189 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 IGLV2-11P01706 119 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 PRR9Q5T870 116 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 TEX261Q6UWH6 196 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 CYB561D1Q8N8Q1 229 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 GNG13Q9P2W3 67 aa12.75□□□□□ -0.37
PTPN11-204ENST00000531326 IGHV3OR16-12A0A075B7B8 117 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 PEX7O00628 323 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 NMBP08949 121 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 LINC00336Q6ZUF6 198 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 LYPD6BQ8NI32 183 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 HIST1H2BAQ96A08 127 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 NEU1Q99519 415 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 MANBALQ9NQG1 85 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 LENEPQ9Y5L5 61 aa12.74□□□□□ -0.37
PTPN11-204ENST00000531326 BTN1A1Q13410 526 aa12.73□□□□□ -0.37
PTPN11-204ENST00000531326 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
PTPN11-204ENST00000531326 LINC00479Q96M42 142 aa12.73□□□□□ -0.37
PTPN11-204ENST00000531326 C20orf144Q9BQM9 153 aa12.73□□□□□ -0.37
PTPN11-204ENST00000531326 TCEAL7Q9BRU2 100 aa12.73□□□□□ -0.37
PTPN11-204ENST00000531326 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 C7orf71A4D174 169 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 K7EQM0 130 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 ZNF680Q8NEM1 530 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 TMEM208Q9BTX3 173 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
PTPN11-204ENST00000531326 DYNC1H1Q14204 4646 aaKnown RBP12.72□□□□□ -0.37
PTPN11-204ENST00000531326 ZNF324O75467 553 aaPredicted RBP12.71□□□□□ -0.37
PTPN11-204ENST00000531326 PRM2P04554 102 aa12.71□□□□□ -0.37
PTPN11-204ENST00000531326 GPX1P07203 203 aa12.71□□□□□ -0.37
PTPN11-204ENST00000531326 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
PTPN11-204ENST00000531326 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
PTPN11-204ENST00000531326 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.37
PTPN11-204ENST00000531326 PKD1P98161 4303 aa12.71□□□□□ -0.38
PTPN11-204ENST00000531326 SCO2A0A1W2PP80 73 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 FBLL1A6NHQ2 334 aaKnown RBP12.7□□□□□ -0.38
PTPN11-204ENST00000531326 RTL8CO15255 209 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 P0DMU3 169 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 FAM231AP0DMU4 169 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 FAM231CP0DMU5 169 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 BCL2P10415 239 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 Q6ZQT7 251 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 LINC01587Q99440 93 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 RYR1P21817 5038 aa12.7□□□□□ -0.38
PTPN11-204ENST00000531326 ZNF705GA8MUZ8 300 aaPredicted RBP12.69□□□□□ -0.38
PTPN11-204ENST00000531326 F6UZH7 168 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 H7BYZ3 331 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 M0R2N4 97 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 IFNA1P01562 189 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 NIPSNAP3BQ9BS92 247 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 TREM1Q9NP99 234 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 KLF12Q9Y4X4 402 aa12.69□□□□□ -0.38
PTPN11-204ENST00000531326 DNAH11Q96DT5 4516 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 AZU1P20160 251 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 TAS2R60P59551 318 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 RRN3P1Q2M238 152 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 Q6AWC8 147 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 Q86TA4 180 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 PCNPQ8WW12 178 aaKnown RBP12.68□□□□□ -0.38
PTPN11-204ENST00000531326 C8orf49Q96NF6 230 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 TXNDC17Q9BRA2 123 aa12.68□□□□□ -0.38
PTPN11-204ENST00000531326 TRBV6-1A0A0K0K1D8 114 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 AKR1C3P42330 323 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 MEF2BQ02080 365 aaPredicted RBP12.67□□□□□ -0.38
PTPN11-204ENST00000531326 TMEM183BQ1AE95 376 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 FMC1Q96HJ9 113 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 NDFIP1Q9BT67 221 aa12.67□□□□□ -0.38
PTPN11-204ENST00000531326 SPART-AS1P0CW21 52 aa12.66□□□□□ -0.38
PTPN11-204ENST00000531326 TAGLN2P37802 199 aaKnown RBP12.66□□□□□ -0.38
PTPN11-204ENST00000531326 EMP1P54849 157 aa12.66□□□□□ -0.38
PTPN11-204ENST00000531326 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
PTPN11-204ENST00000531326 LINC00467Q9BRT7 94 aa12.66□□□□□ -0.38
PTPN11-204ENST00000531326 VAX2Q9UIW0 290 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms