RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 OR10G4Q8NGN3 311 aa5.31□□□□□ -1.56
CD44-232ENST00000531118 BAALCQ8WXS3 180 aa5.31□□□□□ -1.56
CD44-232ENST00000531118 ARPC5LQ9BPX5 153 aa5.31□□□□□ -1.56
CD44-232ENST00000531118 SOSTQ9BQB4 213 aa5.31□□□□□ -1.56
CD44-232ENST00000531118 SLC25A21Q9BQT8 299 aaPredicted RBP5.31□□□□□ -1.56
CD44-232ENST00000531118 RTBDNQ9BSG5 229 aaPredicted RBP5.31□□□□□ -1.56
CD44-232ENST00000531118 TP53TG3Q9ULZ0 132 aa5.31□□□□□ -1.56
CD44-232ENST00000531118 PMS2P5A8MQ11 134 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 CENPXA8MT69 81 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 KLLNB2CW77 178 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 LINC00869P0C866 280 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 IAPPP10997 89 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 RAB11AP62491 216 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 SMCO1Q147U7 214 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 ACOT7LQ6ZUV0 252 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 SH2D6Q7Z4S9 175 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 IQCF2Q8IXL9 164 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 NHLRC2Q8NBF2 726 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
CD44-232ENST00000531118 PAIP2BQ9ULR5 123 aaKnown RBP5.3□□□□□ -1.56
CD44-232ENST00000531118 NAP1L6A6NFF2 107 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 H3BTX0 84 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 HYPMO75409 117 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 SNRPCP09234 159 aaKnown RBP5.29□□□□□ -1.56
CD44-232ENST00000531118 OR5G3P0C626 314 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 OR4E1P0C645 316 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 CCR6P51684 374 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 CD300CQ08708 224 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 TMEM128Q5BJH2 165 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 TRIQKQ629K1 86 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 CYP2G1PQ6ZSU1 146 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 Q8N976 141 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 OR10P1Q8NGE3 313 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 RBM38Q9H0Z9 239 aaKnown RBP5.29□□□□□ -1.56
CD44-232ENST00000531118 V9GYH0 126 aa5.29□□□□□ -1.56
CD44-232ENST00000531118 IGHV1OR15-1A0A075B7D0 117 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 TRAV8-3A0A0A6YYJ7 113 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 A0A0B4J2A0 478 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 DUXBA0A1W2PPF3 345 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 RNF222A6NCQ9 220 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 TRIAP1O43715 76 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 MPDU1O75352 247 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 PLP1P60201 277 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 CNPY1Q3B7I2 92 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 PRR9Q5T870 116 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 TRIM63Q969Q1 353 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 FAM19A4Q96LR4 140 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 SHPKQ9UHJ6 478 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 PXMP4Q9Y6I8 212 aa5.28□□□□□ -1.56
CD44-232ENST00000531118 TRAV4A0A0B4J268 109 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 IL5P05113 134 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 UBE2MP61081 183 aaKnown RBP5.27□□□□□ -1.57
CD44-232ENST00000531118 OPCMLQ14982 345 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 Q6ZNX1 250 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 LINC01600Q96MT4 127 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 ARV1Q9H2C2 271 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 DPH3P1Q9H4G8 78 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
CD44-232ENST00000531118 SMCO3A2RU48 225 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 MED6O75586 246 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 CRISP2P16562 243 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 ANXA7P20073 488 aaKnown RBP5.26□□□□□ -1.57
CD44-232ENST00000531118 RNASE4P34096 147 aaKnown RBP5.26□□□□□ -1.57
CD44-232ENST00000531118 RPP30P78346 268 aaKnown RBP5.26□□□□□ -1.57
CD44-232ENST00000531118 ERCC8Q13216 396 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 PATE2Q6UY27 113 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 Q6ZQT7 251 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 S100A7AQ86SG5 101 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 HSD17B11Q8NBQ5 300 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 RMI2Q96E14 147 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 SRRQ9GZT4 340 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 RNF24Q9Y225 148 aa5.26□□□□□ -1.57
CD44-232ENST00000531118 A0A0D9SG52 128 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 F5H697 171 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 PANO1I0J062 215 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 SFT2D2O95562 160 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 IGLC2P0DOY2 106 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 SLC25A6P12236 298 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 GATA1P15976 413 aaPredicted RBP5.25□□□□□ -1.57
CD44-232ENST00000531118 SELENOTP62341 195 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 LYZL2Q7Z4W2 148 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 DAZ4Q86SG3 579 aaKnown RBP5.25□□□□□ -1.57
CD44-232ENST00000531118 BPIFA4PQ86YQ2 179 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 ZFAND2AQ8N6M9 145 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 RASL10AQ92737 203 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 CIB3Q96Q77 187 aaPredicted RBP5.25□□□□□ -1.57
CD44-232ENST00000531118 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 ARL6Q9H0F7 186 aa5.25□□□□□ -1.57
CD44-232ENST00000531118 DAZ3Q9NR90 486 aaKnown RBP5.25□□□□□ -1.57
CD44-232ENST00000531118 IGKV2D-24A0A075B6R9 120 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 IGHV3-16A0A0C4DH30 117 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 A0A0J9YXV3 536 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 GGTLC3B5MD39 225 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 H3BP45 60 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 H3BQ15 152 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 M0R3E3 92 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 NDUFB6O95139 128 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 GPX1P07203 203 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms