RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 ZNF680Q8NEM1 530 aa7.9□□□□□ -1.14
CAPN1-218ENST00000530442 C2CD4CQ8TF44 421 aa7.9□□□□□ -1.14
CAPN1-218ENST00000530442 LOC102723971A0A1B0GUV8 181 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 SMIM9A6NGZ8 99 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 ZNF705GA8MUZ8 300 aaPredicted RBP7.89□□□□□ -1.15
CAPN1-218ENST00000530442 H7BYZ3 331 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 IFNA1P01562 189 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 RNASE4P34096 147 aaKnown RBP7.89□□□□□ -1.15
CAPN1-218ENST00000530442 AKR1C3P42330 323 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 TAS2R60P59551 318 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 PMS2P11Q13670 270 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 Q6AWC8 147 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 PRNTQ86SH4 94 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 PCNPQ8WW12 178 aaKnown RBP7.89□□□□□ -1.15
CAPN1-218ENST00000530442 C8orf49Q96NF6 230 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 LINC01587Q99440 93 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 NIPSNAP3BQ9BS92 247 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 TREM1Q9NP99 234 aa7.89□□□□□ -1.15
CAPN1-218ENST00000530442 PLAC8L1A1L4L8 177 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 FBLL1A6NHQ2 334 aaKnown RBP7.88□□□□□ -1.15
CAPN1-218ENST00000530442 AZU1P20160 251 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 MEF2BQ02080 365 aaPredicted RBP7.88□□□□□ -1.15
CAPN1-218ENST00000530442 RNASE8Q8TDE3 154 aaKnown RBP7.88□□□□□ -1.15
CAPN1-218ENST00000530442 C11orf52Q96A22 123 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 FMC1Q96HJ9 113 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 PYGO2Q9BRQ0 406 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 NDFIP1Q9BT67 221 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 CELA1Q9UNI1 258 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 KLF12Q9Y4X4 402 aa7.88□□□□□ -1.15
CAPN1-218ENST00000530442 TRBV6-1A0A0K0K1D8 114 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 HTN1P15515 57 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 ZNF80P51504 273 aaPredicted RBP7.87□□□□□ -1.15
CAPN1-218ENST00000530442 UBE2G1P62253 170 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 TMEM183BQ1AE95 376 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 IL17DQ8TAD2 202 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 TMEM263Q8WUH6 116 aaKnown RBP7.87□□□□□ -1.15
CAPN1-218ENST00000530442 TXNDC17Q9BRA2 123 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 VAX2Q9UIW0 290 aa7.87□□□□□ -1.15
CAPN1-218ENST00000530442 TMEM189A5PLL7 270 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 GCGP01275 180 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 LTAP01374 205 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 TAGLN2P37802 199 aaKnown RBP7.86□□□□□ -1.15
CAPN1-218ENST00000530442 EMP1P54849 157 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 C16orf74Q96GX8 76 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 LINC00467Q9BRT7 94 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 DERL1Q9BUN8 251 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 LYSTQ99698 3801 aa7.86□□□□□ -1.15
CAPN1-218ENST00000530442 IGHV1OR15-1A0A075B7D0 117 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 TRAV21A0A0B4J279 112 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 RGS13O14921 159 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 PDE6DO43924 150 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 RPL35P42766 123 aaKnown RBP7.85□□□□□ -1.15
CAPN1-218ENST00000530442 NANOS2P60321 138 aaKnown RBP7.85□□□□□ -1.15
CAPN1-218ENST00000530442 SMUG1Q53HV7 270 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 TOR2AQ5JU69 321 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 ZNF506Q5JVG8 444 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 MUC21Q5SSG8 566 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 SAPCD1Q5SSQ6 148 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 COX8CQ7Z4L0 72 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 EIF4E3Q8N5X7 224 aaKnown RBP7.85□□□□□ -1.15
CAPN1-218ENST00000530442 C11orf72Q8NBR9 251 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 C11orf45Q8TAV5 145 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 MUC7Q8TAX7 377 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 ZC2HC1AQ96GY0 325 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 DKK2Q9UBU2 259 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 TP53TG3Q9ULZ0 132 aa7.85□□□□□ -1.15
CAPN1-218ENST00000530442 RBFOX3A6NFN3 312 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 CBY3A6NI87 242 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 PFN1P07737 140 aaKnown RBP7.84□□□□□ -1.15
CAPN1-218ENST00000530442 IFITM2Q01629 132 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 ANXA2RQ3ZCQ2 193 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 FAM222AQ5U5X8 452 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 NHLRC2Q8NBF2 726 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 FAM210AQ96ND0 272 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 C11orf21Q9P2W6 132 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 NAGKQ9UJ70 344 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 ZFP30Q9Y2G7 519 aa7.84□□□□□ -1.15
CAPN1-218ENST00000530442 CXorf65A6NEN9 183 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 S100A9P06702 114 aaKnown RBP7.83□□□□□ -1.16
CAPN1-218ENST00000530442 TDRG1Q3Y452 100 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 CENPWQ5EE01 88 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 ZNF493Q6ZR52 646 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 Q6ZTC4 211 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 ZNF767PQ75MW2 155 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 TMEM183AQ8IXX5 376 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 MLST8Q9BVC4 326 aa7.83□□□□□ -1.16
CAPN1-218ENST00000530442 ALMS1Q8TCU4 4167 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 TRBV20OR9-2A0A075B6H5 130 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 LYRM9A8MSI8 78 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 TYMSP04818 313 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 CRIP1P50238 77 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 C12orf74Q32Q52 190 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 IBA57Q5T440 356 aaKnown RBP7.82□□□□□ -1.16
CAPN1-218ENST00000530442 ZFAND6Q6FIF0 208 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 FAM159AQ6UWV7 190 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 NOP10Q9NPE3 64 aaKnown RBP7.82□□□□□ -1.16
CAPN1-218ENST00000530442 GSN-AS1Q9NRJ2 163 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms