RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 WDR61Q9GZS3 305 aaKnown RBP8.96□□□□□ -0.98
CPSF1-204ENST00000529288 ZNF492Q9P255 531 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 MBD2Q9UBB5 411 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 ICOSQ9Y6W8 199 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 LRP1BQ9NZR2 4599 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 HSPG2P98160 4391 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
CPSF1-204ENST00000529288 CDK2AP2O75956 126 aa8.95□□□□□ -0.98
CPSF1-204ENST00000529288 FXYD5Q96DB9 178 aa8.95□□□□□ -0.98
CPSF1-204ENST00000529288 C8orf49Q96NF6 230 aa8.95□□□□□ -0.98
CPSF1-204ENST00000529288 MRPL32Q9BYC8 188 aaKnown RBP8.95□□□□□ -0.98
CPSF1-204ENST00000529288 SMIM3Q9BZL3 60 aa8.95□□□□□ -0.98
CPSF1-204ENST00000529288 KCNIP2Q9NS61 270 aa8.95□□□□□ -0.98
CPSF1-204ENST00000529288 SIVA1O15304 175 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 EIF3GO75821 320 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPSF1-204ENST00000529288 NXPH4O95158 308 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 NMBP08949 121 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 LINC00315P59091 139 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 KRTAP10-2P60368 255 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
CPSF1-204ENST00000529288 ZNF415Q09FC8 603 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 FFAR4Q5NUL3 377 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 IBA57Q5T440 356 aaKnown RBP8.94□□□□□ -0.98
CPSF1-204ENST00000529288 SCGB1C1Q8TD33 95 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 ST6GAL2Q96JF0 529 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 HYLS1Q96M11 299 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 C18orf15Q96N68 181 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 RPH3ALQ9UNE2 315 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 HHLA3Q9XRX5 114 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 HSPB11Q9Y547 144 aa8.94□□□□□ -0.98
CPSF1-204ENST00000529288 TRGV4A0A0C4DH28 118 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 RGS21Q2M5E4 152 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 Q5BKY6 102 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 ATP5SQ99766 215 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 NAGKQ9UJ70 344 aa8.93□□□□□ -0.98
CPSF1-204ENST00000529288 IFNA5P01569 189 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 PET100P0DJ07 73 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 RPL12P30050 165 aaKnown RBP8.92□□□□□ -0.98
CPSF1-204ENST00000529288 FUSP35637 526 aaKnown RBP eCLIP8.92□□□□□ -0.98
CPSF1-204ENST00000529288 CRYBA4P53673 196 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 SLAQ13239 276 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 MED28Q9H204 178 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 TNFRSF18Q9Y5U5 241 aa8.92□□□□□ -0.98
CPSF1-204ENST00000529288 G3V3Q6 166 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 SFTA3P0C7M3 94 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 FHL2Q14192 279 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
CPSF1-204ENST00000529288 TMEM183BQ1AE95 376 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 KHDC3LQ587J8 217 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 LYPD5Q6UWN5 251 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 FAM159AQ6UWV7 190 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 TMEM183AQ8IXX5 376 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 SCRT2Q9NQ03 307 aa8.91□□□□□ -0.98
CPSF1-204ENST00000529288 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 PGPA6NDG6 321 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 EREGO14944 169 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 GIPP09681 153 aaPredicted RBP8.9□□□□□ -0.98
CPSF1-204ENST00000529288 BTF3P20290 206 aaKnown RBP8.9□□□□□ -0.98
CPSF1-204ENST00000529288 TAS2R45P59539 299 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 ZNF266Q14584 549 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 LYPD1Q8N2G4 141 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 CMTM2Q8TAZ6 248 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 PCNPQ8WW12 178 aaKnown RBP8.9□□□□□ -0.98
CPSF1-204ENST00000529288 ZNF479Q96JC4 524 aa8.9□□□□□ -0.98
CPSF1-204ENST00000529288 MUC4Q99102 2169 aa8.89□□□□□ -0.99
CPSF1-204ENST00000529288 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
CPSF1-204ENST00000529288 TRGV11A0A075B6L2 103 aa8.89□□□□□ -0.99
CPSF1-204ENST00000529288 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
CPSF1-204ENST00000529288 SRIP30626 198 aa8.89□□□□□ -0.99
CPSF1-204ENST00000529288 NEGR1Q7Z3B1 354 aa8.89□□□□□ -0.99
CPSF1-204ENST00000529288 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 TRBV7-9A0A0J9YWB2 115 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 A0A1W2PPV4 95 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 GNRH2O43555 120 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 GYPEP15421 78 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 ERVFC1-1P60608 527 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 FAM74A1Q5RGS3 127 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 Q8N1X5 172 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 ASB13Q8WXK3 278 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 AQP10Q96PS8 301 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 SPXQ9BT56 116 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
CPSF1-204ENST00000529288 RNF222A6NCQ9 220 aa8.87□□□□□ -0.99
CPSF1-204ENST00000529288 F6UZH7 168 aa8.87□□□□□ -0.99
CPSF1-204ENST00000529288 K7EQD1 137 aa8.87□□□□□ -0.99
CPSF1-204ENST00000529288 HMGB3O15347 200 aaKnown RBP8.87□□□□□ -0.99
CPSF1-204ENST00000529288 ACOT6Q3I5F7 207 aaPredicted RBP8.87□□□□□ -0.99
CPSF1-204ENST00000529288 Q6AWC8 147 aa8.87□□□□□ -0.99
CPSF1-204ENST00000529288 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
CPSF1-204ENST00000529288 OR4C5Q8NGB2 326 aa8.87□□□□□ -0.99
CPSF1-204ENST00000529288 LY96Q9Y6Y9 160 aa8.87□□□□□ -0.99
CPSF1-204ENST00000529288 GNG5P63218 68 aa8.86□□□□□ -0.99
CPSF1-204ENST00000529288 NFE4Q86UQ8 179 aa8.86□□□□□ -0.99
CPSF1-204ENST00000529288 WFDC10BQ8IUB3 73 aa8.86□□□□□ -0.99
CPSF1-204ENST00000529288 OR10G4Q8NGN3 311 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 391.7 ms