RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 H3BNG1 76 aa23.09■■□□□ 1.29
SSSCA1-205ENST00000527920 ARL14EPLP0DKL9 152 aa23.09■■□□□ 1.29
SSSCA1-205ENST00000527920 RAB24Q969Q5 203 aa23.09■■□□□ 1.29
SSSCA1-205ENST00000527920 HOXA5P20719 270 aa23.08■■□□□ 1.29
SSSCA1-205ENST00000527920 OR5I1Q13606 314 aa23.08■■□□□ 1.29
SSSCA1-205ENST00000527920 Q6AWC8 147 aa23.08■■□□□ 1.29
SSSCA1-205ENST00000527920 SUN5Q8TC36 379 aa23.08■■□□□ 1.29
SSSCA1-205ENST00000527920 GNPNAT1Q96EK6 184 aaPredicted RBP23.08■■□□□ 1.29
SSSCA1-205ENST00000527920 TRAV26-1A0A087WT03 109 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 M0R2N4 97 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 HMGB3O15347 200 aaKnown RBP23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 SPINK4O60575 86 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 Q6ZQT7 251 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 ARPC5LQ9BPX5 153 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 TMPRSS5Q9H3S3 457 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 KLF12Q9Y4X4 402 aa23.07■■□□□ 1.28
SSSCA1-205ENST00000527920 NACAE9PAV3 2078 aa23.06■■□□□ 1.28
SSSCA1-205ENST00000527920 TRGV2A0A075B6R0 118 aa23.06■■□□□ 1.28
SSSCA1-205ENST00000527920 BORCS7-ASMTA0A0B4J1R7 106 aa23.06■■□□□ 1.28
SSSCA1-205ENST00000527920 CCL18P55774 89 aa23.06■■□□□ 1.28
SSSCA1-205ENST00000527920 ST6GAL2Q96JF0 529 aa23.06■■□□□ 1.28
SSSCA1-205ENST00000527920 SH3BGRL3Q9H299 93 aa23.06■■□□□ 1.28
SSSCA1-205ENST00000527920 IGLV2-18A0A075B6J9 118 aa23.05■■□□□ 1.28
SSSCA1-205ENST00000527920 TRGV1A0A0A0MS02 117 aa23.05■■□□□ 1.28
SSSCA1-205ENST00000527920 TP53TG3Q9ULZ0 132 aa23.05■■□□□ 1.28
SSSCA1-205ENST00000527920 SERTM2A0A1B0GWG4 89 aa23.04■■□□□ 1.28
SSSCA1-205ENST00000527920 G3V3Q6 166 aa23.04■■□□□ 1.28
SSSCA1-205ENST00000527920 GCHFRP30047 84 aa23.04■■□□□ 1.28
SSSCA1-205ENST00000527920 RPL7L1Q6DKI1 246 aaKnown RBP23.04■■□□□ 1.28
SSSCA1-205ENST00000527920 GOLT1AQ6ZVE7 132 aa23.04■■□□□ 1.28
SSSCA1-205ENST00000527920 HECTD4Q9Y4D8 3996 aa23.04■■□□□ 1.28
SSSCA1-205ENST00000527920 ZNF415Q09FC8 603 aa23.03■■□□□ 1.28
SSSCA1-205ENST00000527920 ACTR3CQ9C0K3 210 aaPredicted RBP23.03■■□□□ 1.28
SSSCA1-205ENST00000527920 RPH3ALQ9UNE2 315 aa23.03■■□□□ 1.28
SSSCA1-205ENST00000527920 ZNRF2Q8NHG8 242 aa23.02■■□□□ 1.28
SSSCA1-205ENST00000527920 TMEM167BQ9NRX6 74 aa23.02■■□□□ 1.28
SSSCA1-205ENST00000527920 DNAH2Q9P225 4427 aa23.01■■□□□ 1.27
SSSCA1-205ENST00000527920 RTL8CO15255 209 aa23.01■■□□□ 1.27
SSSCA1-205ENST00000527920 CXorf1O96002 111 aa23.01■■□□□ 1.27
SSSCA1-205ENST00000527920 C5orf17Q8NAS9 161 aa23.01■■□□□ 1.27
SSSCA1-205ENST00000527920 TDRG1Q3Y452 100 aa23■■□□□ 1.27
SSSCA1-205ENST00000527920 LINC00588Q9Y4M8 146 aa23■■□□□ 1.27
SSSCA1-205ENST00000527920 TAAR5O14804 337 aa22.99■■□□□ 1.27
SSSCA1-205ENST00000527920 A0A0J9YY99 117 aa22.98■■□□□ 1.27
SSSCA1-205ENST00000527920 MUC21Q5SSG8 566 aa22.98■■□□□ 1.27
SSSCA1-205ENST00000527920 FAM159AQ6UWV7 190 aa22.98■■□□□ 1.27
SSSCA1-205ENST00000527920 TRGV11A0A075B6L2 103 aa22.97■■□□□ 1.27
SSSCA1-205ENST00000527920 TRAV8-1A0A0A6YYK1 113 aa22.97■■□□□ 1.27
SSSCA1-205ENST00000527920 GNG5P63218 68 aa22.97■■□□□ 1.27
SSSCA1-205ENST00000527920 SOHLH1Q5JUK2 328 aa22.97■■□□□ 1.27
SSSCA1-205ENST00000527920 FAT2Q9NYQ8 4349 aa22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 MUC4Q99102 2169 aa22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 TCRAP04437 139 aa22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 SSX7Q7RTT5 188 aa22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 TVP23CQ96ET8 276 aa22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 TREM1Q9NP99 234 aa22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 MRPL16Q9NX20 251 aaKnown RBP22.96■■□□□ 1.27
SSSCA1-205ENST00000527920 VSIG2Q96IQ7 327 aa22.95■■□□□ 1.26
SSSCA1-205ENST00000527920 SPXQ9BT56 116 aa22.95■■□□□ 1.26
SSSCA1-205ENST00000527920 TRAV21A0A0B4J279 112 aa22.94■■□□□ 1.26
SSSCA1-205ENST00000527920 K7EQM0 130 aa22.94■■□□□ 1.26
SSSCA1-205ENST00000527920 MDFICQ9P1T7 246 aa22.94■■□□□ 1.26
SSSCA1-205ENST00000527920 CTXND1A0A1B0GTU2 59 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 PRSS29PA6NIE9 313 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 GGTLC3B5MD39 225 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 ARPC5O15511 151 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 TMEM183BQ1AE95 376 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 C1orf134Q5TEV5 83 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 TMEM183AQ8IXX5 376 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 NDFIP1Q9BT67 221 aa22.93■■□□□ 1.26
SSSCA1-205ENST00000527920 DNAH17Q9UFH2 4485 aa22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 NBDYA0A0U1RRE5 68 aa22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 A0A1B0GVY2 172 aa22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 A0A1W2PRE2 83 aa22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 SUMO1P63165 101 aaKnown RBP22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 SLAQ13239 276 aa22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 EPDR1Q9UM22 224 aa22.92■■□□□ 1.26
SSSCA1-205ENST00000527920 FBLL1A6NHQ2 334 aaKnown RBP22.91■■□□□ 1.26
SSSCA1-205ENST00000527920 ZNF726P1Q15940 193 aa22.91■■□□□ 1.26
SSSCA1-205ENST00000527920 RASL10AQ92737 203 aa22.91■■□□□ 1.26
SSSCA1-205ENST00000527920 UPK3BQ9BT76 320 aa22.91■■□□□ 1.26
SSSCA1-205ENST00000527920 F6UZH7 168 aa22.9■■□□□ 1.26
SSSCA1-205ENST00000527920 CYTL1Q9NRR1 136 aa22.9■■□□□ 1.26
SSSCA1-205ENST00000527920 AKR1C8PQ5T2L2 129 aa22.89■■□□□ 1.25
SSSCA1-205ENST00000527920 CYB561D1Q8N8Q1 229 aa22.89■■□□□ 1.25
SSSCA1-205ENST00000527920 PRO0255Q9UI72 69 aa22.89■■□□□ 1.25
SSSCA1-205ENST00000527920 NAGKQ9UJ70 344 aa22.89■■□□□ 1.25
SSSCA1-205ENST00000527920 A0A096LPF7 62 aa22.88■■□□□ 1.25
SSSCA1-205ENST00000527920 ESRGQ1W209 222 aa22.88■■□□□ 1.25
SSSCA1-205ENST00000527920 KCNS1Q96KK3 526 aa22.88■■□□□ 1.25
SSSCA1-205ENST00000527920 MRPS16Q9Y3D3 137 aaKnown RBP22.88■■□□□ 1.25
SSSCA1-205ENST00000527920 IGLV2-11P01706 119 aa22.87■■□□□ 1.25
SSSCA1-205ENST00000527920 ZNF345Q14585 488 aa22.87■■□□□ 1.25
SSSCA1-205ENST00000527920 IQCF2Q8IXL9 164 aa22.87■■□□□ 1.25
SSSCA1-205ENST00000527920 TMEM75Q8N9X5 138 aa22.87■■□□□ 1.25
SSSCA1-205ENST00000527920 PSG8Q9UQ74 426 aa22.87■■□□□ 1.25
SSSCA1-205ENST00000527920 IGHV3-16A0A0C4DH30 117 aa22.86■■□□□ 1.25
SSSCA1-205ENST00000527920 PAX4O43316 350 aa22.86■■□□□ 1.25
SSSCA1-205ENST00000527920 IGHV3-53P01767 116 aa22.86■■□□□ 1.25
SSSCA1-205ENST00000527920 FLI1Q01543 452 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms