RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
TSKU-203ENST00000527881 ERCC8Q13216 396 aa9.74□□□□□ -0.85
TSKU-203ENST00000527881 IGHV3-23P01764 117 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 CTSZQ9UBR2 303 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 DEFB104AQ8WTQ1 72 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 SLC25A20O43772 301 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 COX7A1P24310 79 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 Q6ZS92 163 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 AJUBAQ96IF1 538 aa9.73□□□□□ -0.85
TSKU-203ENST00000527881 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 MAFAQ8NHW3 353 aaPredicted RBP9.72□□□□□ -0.85
TSKU-203ENST00000527881 FAM110AQ9BQ89 295 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 LINC00574Q9H8X3 128 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 BEX4Q9NWD9 120 aaPredicted RBP9.72□□□□□ -0.85
TSKU-203ENST00000527881 SIT1Q9Y3P8 196 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 NCOR1O75376 2440 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 I3L2K1 104 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 NHLRC4P0CG21 123 aaPredicted RBP9.72□□□□□ -0.85
TSKU-203ENST00000527881 TMEM155Q4W5P6 130 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 SLC25A15Q9Y619 301 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 MALRD1Q5VYJ5 2156 aa9.72□□□□□ -0.85
TSKU-203ENST00000527881 CEACAM4O75871 244 aa9.71□□□□□ -0.85
TSKU-203ENST00000527881 PMS2CLQ68D20 193 aa9.71□□□□□ -0.85
TSKU-203ENST00000527881 RHODO00212 210 aa9.71□□□□□ -0.85
TSKU-203ENST00000527881 CACNA1BQ00975 2339 aa9.71□□□□□ -0.85
TSKU-203ENST00000527881 GPR179Q6PRD1 2367 aa9.71□□□□□ -0.86
TSKU-203ENST00000527881 J3KRW8 73 aa9.71□□□□□ -0.86
TSKU-203ENST00000527881 CD40P25942 277 aa9.71□□□□□ -0.86
TSKU-203ENST00000527881 CCL11P51671 97 aa9.71□□□□□ -0.86
TSKU-203ENST00000527881 NTN5Q8WTR8 489 aaPredicted RBP9.71□□□□□ -0.86
TSKU-203ENST00000527881 ZNF576Q9H609 170 aa9.71□□□□□ -0.86
TSKU-203ENST00000527881 CRLF1O75462 422 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 PDE6HQ13956 83 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 TMEM95Q3KNT9 176 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 MEIG1Q5JSS6 88 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 NDUFA11Q86Y39 141 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 TEX22C9J3V5 150 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 LYPD2Q6UXB3 125 aa9.7□□□□□ -0.86
TSKU-203ENST00000527881 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
TSKU-203ENST00000527881 IGHV4-39P01824 125 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 GATA4P43694 442 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 MRGPRG-AS1Q2M3A8 158 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 RAI1Q7Z5J4 1906 aaPredicted RBP9.69□□□□□ -0.86
TSKU-203ENST00000527881 K7EIM0 57 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 UBE2D3P61077 147 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 UBE2D2P62837 147 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 TDHQ8IZJ6 230 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 CFHR4Q92496 578 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 UBE2D1P51668 147 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 HERVK_113P61574 105 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 IL17RELQ6ZVW7 336 aa9.69□□□□□ -0.86
TSKU-203ENST00000527881 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 MGPP08493 103 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 Q6ZQT7 251 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 C15orf53Q8NAA6 179 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 CITED1Q99966 193 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 CACNA1GO43497 2377 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 HES1Q14469 280 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 WDFY4Q6ZS81 3184 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 DCHS1Q96JQ0 3298 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 M0R381 172 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 SPRY2O43597 315 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 THBDP07204 575 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 SRD5A1P18405 259 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 DYNAPQ8N1N2 210 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 RNF182Q8N6D2 247 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 SPRY4Q9C004 299 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 PRO1854Q9UHT4 67 aa9.68□□□□□ -0.86
TSKU-203ENST00000527881 IGLV2-18A0A075B6J9 118 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 IGHV3-66A0A0C4DH42 116 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
TSKU-203ENST00000527881 SMIM2Q9BVW6 85 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 ASIPP42127 132 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 ORMDL2Q53FV1 153 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 GFRALQ6UXV0 394 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 C10orf126Q8N4M7 172 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 PCNX1Q96RV3 2341 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 TNFRSF13BO14836 293 aaPredicted RBP9.67□□□□□ -0.86
TSKU-203ENST00000527881 FCN3O75636 299 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 CRIP2P52943 208 aaPredicted RBP9.67□□□□□ -0.86
TSKU-203ENST00000527881 MFAP4P55083 255 aa9.67□□□□□ -0.86
TSKU-203ENST00000527881 LINC01619G3V211 115 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 MRPS12O15235 138 aaKnown RBP9.66□□□□□ -0.86
TSKU-203ENST00000527881 C2orf66Q6UXQ4 117 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 RAB1BQ9H0U4 201 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 CNOT1A5YKK6 2376 aaKnown RBP9.66□□□□□ -0.86
TSKU-203ENST00000527881 IGHV1-3A0A0C4DH29 117 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 LINC01546A6NGU7 62 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 NRACQ8N912 160 aa9.66□□□□□ -0.86
TSKU-203ENST00000527881 CFAP47Q6ZTR5 3102 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 IGLV3-9A0A075B6K5 115 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 PRAC2D3DTV9 90 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms