RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 E5RGE8 158 aa15.93■□□□□ 0.14
CPSF1-202ENST00000527827 K7EQD1 137 aa15.93■□□□□ 0.14
CPSF1-202ENST00000527827 S100A10P60903 97 aa15.93■□□□□ 0.14
CPSF1-202ENST00000527827 HBG1P69891 147 aa15.93■□□□□ 0.14
CPSF1-202ENST00000527827 HBG2P69892 147 aa15.93■□□□□ 0.14
CPSF1-202ENST00000527827 SRRM2Q9UQ35 2752 aaKnown RBP15.93■□□□□ 0.14
CPSF1-202ENST00000527827 TRAV6A0A075B6T7 132 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 TRGV4A0A0C4DH28 118 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 SMR3BP02814 79 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-202ENST00000527827 NBEAP1P0C6P0 100 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 SFTA3P0C7M3 94 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 ZNF138P52744 262 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 RAB32Q13637 225 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 ATP6V1FQ16864 119 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 MIR17HGQ75NE6 70 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 STX12Q86Y82 276 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 IQCF2Q8IXL9 164 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 Q8TAT8 98 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 ZNF479Q96JC4 524 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 NPCDR1Q9BY65 106 aa15.92■□□□□ 0.14
CPSF1-202ENST00000527827 TRBV7-9A0A0J9YWB2 115 aa15.91■□□□□ 0.14
CPSF1-202ENST00000527827 K7EP13 123 aa15.91■□□□□ 0.14
CPSF1-202ENST00000527827 TCRBP04435 133 aa15.91■□□□□ 0.14
CPSF1-202ENST00000527827 GCSHP23434 173 aa15.91■□□□□ 0.14
CPSF1-202ENST00000527827 SRIP30626 198 aa15.91■□□□□ 0.14
CPSF1-202ENST00000527827 GPN1Q9HCN4 374 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-202ENST00000527827 MDFICQ9P1T7 246 aa15.91■□□□□ 0.14
CPSF1-202ENST00000527827 LYRM1O43325 122 aa15.9■□□□□ 0.14
CPSF1-202ENST00000527827 GYPEP15421 78 aa15.9■□□□□ 0.14
CPSF1-202ENST00000527827 MUC21Q5SSG8 566 aa15.9■□□□□ 0.14
CPSF1-202ENST00000527827 OR10G4Q8NGN3 311 aa15.9■□□□□ 0.14
CPSF1-202ENST00000527827 EVI2AP22794 236 aa15.89■□□□□ 0.13
CPSF1-202ENST00000527827 FXYD5Q96DB9 178 aa15.89■□□□□ 0.13
CPSF1-202ENST00000527827 OR51M1Q9H341 326 aa15.89■□□□□ 0.13
CPSF1-202ENST00000527827 OR10J4P0C629 311 aa15.88■□□□□ 0.13
CPSF1-202ENST00000527827 ZNF266Q14584 549 aa15.88■□□□□ 0.13
CPSF1-202ENST00000527827 RASL10AQ92737 203 aa15.88■□□□□ 0.13
CPSF1-202ENST00000527827 PHYHIPLQ96FC7 376 aa15.88■□□□□ 0.13
CPSF1-202ENST00000527827 NUDT15Q9NV35 164 aa15.88■□□□□ 0.13
CPSF1-202ENST00000527827 HAMPP81172 84 aa15.87■□□□□ 0.13
CPSF1-202ENST00000527827 THAP6Q8TBB0 222 aa15.87■□□□□ 0.13
CPSF1-202ENST00000527827 PCNPQ8WW12 178 aaKnown RBP15.87■□□□□ 0.13
CPSF1-202ENST00000527827 ORM1P02763 201 aa15.86■□□□□ 0.13
CPSF1-202ENST00000527827 NHLH2Q02577 135 aa15.86■□□□□ 0.13
CPSF1-202ENST00000527827 SPXQ9BT56 116 aa15.86■□□□□ 0.13
CPSF1-202ENST00000527827 PAXXQ9BUH6 204 aa15.86■□□□□ 0.13
CPSF1-202ENST00000527827 CRYGDP07320 174 aa15.85■□□□□ 0.13
CPSF1-202ENST00000527827 RBAKDNA6NC62 111 aa15.84■□□□□ 0.13
CPSF1-202ENST00000527827 TMEM183BQ1AE95 376 aa15.84■□□□□ 0.13
CPSF1-202ENST00000527827 Q6AWC8 147 aa15.84■□□□□ 0.13
CPSF1-202ENST00000527827 TMEM183AQ8IXX5 376 aa15.84■□□□□ 0.13
CPSF1-202ENST00000527827 TXNDC17Q9BRA2 123 aa15.84■□□□□ 0.13
CPSF1-202ENST00000527827 LRCOL1A6NCL2 159 aa15.83■□□□□ 0.12
CPSF1-202ENST00000527827 C10orf126Q8N4M7 172 aa15.83■□□□□ 0.12
CPSF1-202ENST00000527827 OR5C1Q8NGR4 320 aa15.83■□□□□ 0.12
CPSF1-202ENST00000527827 TRGV11A0A075B6L2 103 aa15.82■□□□□ 0.12
CPSF1-202ENST00000527827 LOC100131303A0A0U1RQF7 123 aa15.82■□□□□ 0.12
CPSF1-202ENST00000527827 FAM229AH3BQW9 127 aa15.82■□□□□ 0.12
CPSF1-202ENST00000527827 H2AFB2P0C5Z0 115 aa15.82■□□□□ 0.12
CPSF1-202ENST00000527827 RANP62826 216 aaKnown RBP15.82■□□□□ 0.12
CPSF1-202ENST00000527827 SLC25A31Q9H0C2 315 aa15.82■□□□□ 0.12
CPSF1-202ENST00000527827 IGLV5-52A0A0A0MRZ9 124 aa15.81■□□□□ 0.12
CPSF1-202ENST00000527827 TRAV4A0A0B4J268 109 aa15.81■□□□□ 0.12
CPSF1-202ENST00000527827 C9JCJ5 164 aa15.81■□□□□ 0.12
CPSF1-202ENST00000527827 CSN1S1P47710 185 aa15.81■□□□□ 0.12
CPSF1-202ENST00000527827 FAM159AQ6UWV7 190 aa15.81■□□□□ 0.12
CPSF1-202ENST00000527827 TMEM70Q9BUB7 260 aa15.81■□□□□ 0.12
CPSF1-202ENST00000527827 Q6ZSN1 163 aa15.8■□□□□ 0.12
CPSF1-202ENST00000527827 LENEPQ9Y5L5 61 aa15.8■□□□□ 0.12
CPSF1-202ENST00000527827 DIRC3C9JPN6 131 aa15.79■□□□□ 0.12
CPSF1-202ENST00000527827 OR7C2O60412 319 aa15.79■□□□□ 0.12
CPSF1-202ENST00000527827 TDRG1Q3Y452 100 aa15.79■□□□□ 0.12
CPSF1-202ENST00000527827 OR4C5Q8NGB2 326 aa15.79■□□□□ 0.12
CPSF1-202ENST00000527827 NTN5Q8WTR8 489 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-202ENST00000527827 WDR61Q9GZS3 305 aaKnown RBP15.79■□□□□ 0.12
CPSF1-202ENST00000527827 IGHV3-38A0A0C4DH36 116 aa15.78■□□□□ 0.12
CPSF1-202ENST00000527827 TIRAPP58753 221 aa15.78■□□□□ 0.12
CPSF1-202ENST00000527827 GNRH2O43555 120 aa15.77■□□□□ 0.12
CPSF1-202ENST00000527827 PSCAO43653 123 aa15.77■□□□□ 0.12
CPSF1-202ENST00000527827 SH2D6Q7Z4S9 175 aa15.77■□□□□ 0.12
CPSF1-202ENST00000527827 KCNIP2Q9NS61 270 aa15.77■□□□□ 0.12
CPSF1-202ENST00000527827 NAGKQ9UJ70 344 aa15.77■□□□□ 0.12
CPSF1-202ENST00000527827 DNAH8Q96JB1 4490 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 IGHV3-16A0A0C4DH30 117 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 M0R2P5 195 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 GATA1P15976 413 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-202ENST00000527827 UBE2L3P68036 154 aaKnown RBP15.76■□□□□ 0.11
CPSF1-202ENST00000527827 LINC01556Q5JQF7 62 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 TMED6Q8WW62 240 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 OR5AC2Q9NZP5 309 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 FAM30AQ9NZY2 134 aa15.76■□□□□ 0.11
CPSF1-202ENST00000527827 IBA57-AS1B1ANH7 110 aa15.75■□□□□ 0.11
CPSF1-202ENST00000527827 Q8N814 137 aa15.75■□□□□ 0.11
CPSF1-202ENST00000527827 NHLRC2Q8NBF2 726 aa15.75■□□□□ 0.11
CPSF1-202ENST00000527827 H0YIZ8 118 aa15.74■□□□□ 0.11
CPSF1-202ENST00000527827 SIX6O95475 246 aa15.74■□□□□ 0.11
CPSF1-202ENST00000527827 FAM240BA0A1B0GVZ2 78 aa15.73■□□□□ 0.11
CPSF1-202ENST00000527827 C17orf112F2Z3M2 114 aa15.73■□□□□ 0.11
CPSF1-202ENST00000527827 PPT1P50897 306 aa15.73■□□□□ 0.11
CPSF1-202ENST00000527827 HYLS1Q96M11 299 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms