RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RPS27P42677 84 aaKnown RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 HERVK_113P61574 105 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 RPS18P62269 152 aaKnown RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 RPL18AQ02543 176 aaKnown RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 PAX8Q06710 450 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 SRSF9Q13242 221 aaKnown RBP eCLIP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 ATXN8Q156A1 80 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 MRPL55Q7Z7F7 128 aaKnown RBP2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 SFTPA2Q8IWL1 248 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 NT5CQ8TCD5 201 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 C10orf105Q8TEF2 133 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 RTL8AQ9BWD3 113 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF442Q9H7R0 627 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 MAP6D1Q9H9H5 199 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 FSCN3Q9NQT6 498 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 GON4LQ3T8J9 2241 aa2.82□□□□□ -1.96
CLNS1A-209ENST00000527299 CEP192Q8TEP8 1941 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 C2orf16Q68DN1 1984 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1D-42A0A075B6H8 117 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 TRBV7-6A0A0J9YX20 115 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 NCBP2LA6PVI3 153 aaKnown RBP2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 KNCNA6PVL3 124 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 INS-IGF2F8WCM5 200 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 SPRY3O43610 288 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 IGLV3-27P01718 113 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 P01737 135 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 SLC25A16P16260 332 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 EMDP50402 254 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 ERVK-16P61578 105 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 ERCC8Q13216 396 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 KISS1Q15726 138 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 TMEM52BQ4KMG9 183 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF818PQ6ZRF7 136 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 NDUFA11Q86Y39 141 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 RNF182Q8N6D2 247 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 WFDC11Q8NEX6 87 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 MRPL53Q96EL3 112 aaKnown RBP2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 SRXN1Q9BYN0 137 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 CYSTM1Q9H1C7 97 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 RPP21Q9H633 154 aaKnown RBP2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 AMMECR1Q9Y4X0 333 aaPredicted RBP2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 U3KQK5 164 aa2.81□□□□□ -1.96
CLNS1A-209ENST00000527299 TET1Q8NFU7 2136 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 MYOFQ9NZM1 2061 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 LTBP2Q14767 1821 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 TRBV19A0A075B6N1 114 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1-9A0A0C4DH69 117 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 TEX49A0A1B0GTD5 131 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 LOC101059948A0A1B0GTJ6 334 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 SRRM4A7MD48 611 aaKnown RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 BUB3O43684 328 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 SS18L1O75177 396 aaPredicted RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1-39P01597 117 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1-5P01602 117 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1D-39P04432 117 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 IGF1P05019 195 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF823P16415 610 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 FCER1GP30273 86 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF138P52744 262 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 EDDM3BP56851 147 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 SYNJ2BPP57105 145 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 FHL5Q5TD97 284 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 FAM104BQ5XKR9 115 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF497Q6ZNH5 498 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 FP248Q71RG6 208 aaPredicted RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 MDP1Q86V88 176 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 VKORC1L1Q8N0U8 176 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 MAPKAPK5-AS1Q8N8E1 139 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 DCAF4L2Q8NA75 395 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 NFAM1Q8NET5 270 aaPredicted RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 SRSF12Q8WXF0 261 aaKnown RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 OVCA2Q8WZ82 227 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 DEFB118Q96PH6 123 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 SPACA5Q96QH8 159 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 METTL26Q96S19 204 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 EMC6Q9BV81 110 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 AICDAQ9GZX7 198 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 DYNLRB1Q9NP97 96 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 DAZ1Q9NQZ3 744 aaKnown RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 PEMTQ9UBM1 199 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 Q9UF83 564 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 LSM7Q9UK45 103 aaKnown RBP2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 SLC25A15Q9Y619 301 aa2.8□□□□□ -1.96
CLNS1A-209ENST00000527299 A0A0B4J2C4 111 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1D-13A0A0B4J2D9 117 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 A0A0D9SEW6 157 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 PLAC8L1A1L4L8 177 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 DDTLA6NHG4 134 aaPredicted RBP2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 NPIPB11E5RHQ5 1161 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 K7EMI3 77 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 M0R1B8 84 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 IGLV3-1P01715 115 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 TCRAP04437 139 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 PRSS2P07478 247 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 P0C879 139 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 IGKV1-13P0DP09 117 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms