RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 C7orf71A4D174 169 aa12.01□□□□□ -0.49
CAPN1-205ENST00000526954 RAB19A4D1S5 217 aa12.01□□□□□ -0.49
CAPN1-205ENST00000526954 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-205ENST00000526954 PRR9Q5T870 116 aa12.01□□□□□ -0.49
CAPN1-205ENST00000526954 ZNF705AQ6ZN79 300 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-205ENST00000526954 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
CAPN1-205ENST00000526954 OVOL2Q9BRP0 275 aa12.01□□□□□ -0.49
CAPN1-205ENST00000526954 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
CAPN1-205ENST00000526954 J3KRW8 73 aa12□□□□□ -0.49
CAPN1-205ENST00000526954 ZNF324O75467 553 aaPredicted RBP12□□□□□ -0.49
CAPN1-205ENST00000526954 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
CAPN1-205ENST00000526954 SRSF3P84103 164 aaKnown RBP12□□□□□ -0.49
CAPN1-205ENST00000526954 Q6AWC8 147 aa12□□□□□ -0.49
CAPN1-205ENST00000526954 TMEM183AQ8IXX5 376 aa12□□□□□ -0.49
CAPN1-205ENST00000526954 TMEM256Q8N2U0 113 aa12□□□□□ -0.49
CAPN1-205ENST00000526954 C8orf49Q96NF6 230 aa12□□□□□ -0.49
CAPN1-205ENST00000526954 GOLT1BQ9Y3E0 138 aa12□□□□□ -0.49
CAPN1-205ENST00000526954 NBEAL2Q6ZNJ1 2754 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 TRAV12-3A0A0B4J271 114 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 RBMY1A1P0DJD3 496 aaKnown RBP11.99□□□□□ -0.49
CAPN1-205ENST00000526954 RBMY1CP0DJD4 496 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
CAPN1-205ENST00000526954 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 RBMY1FQ15415 496 aaKnown RBP11.99□□□□□ -0.49
CAPN1-205ENST00000526954 SMUG1Q53HV7 270 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 BAGE2Q86Y30 109 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 MLST8Q9BVC4 326 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 ZMAT4Q9H898 229 aa11.99□□□□□ -0.49
CAPN1-205ENST00000526954 C9JQL5 133 aa11.98□□□□□ -0.49
CAPN1-205ENST00000526954 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
CAPN1-205ENST00000526954 NEU1Q99519 415 aa11.98□□□□□ -0.49
CAPN1-205ENST00000526954 NIPSNAP3BQ9BS92 247 aa11.98□□□□□ -0.49
CAPN1-205ENST00000526954 PARLQ9H300 379 aa11.98□□□□□ -0.49
CAPN1-205ENST00000526954 RETNQ9HD89 108 aa11.98□□□□□ -0.49
CAPN1-205ENST00000526954 LINC00862A6NCI5 91 aa11.97□□□□□ -0.49
CAPN1-205ENST00000526954 H7BYZ3 331 aa11.97□□□□□ -0.49
CAPN1-205ENST00000526954 OR11H2Q8NH07 326 aa11.97□□□□□ -0.49
CAPN1-205ENST00000526954 X6R8D5 127 aa11.97□□□□□ -0.49
CAPN1-205ENST00000526954 TRBV20OR9-2A0A075B6H5 130 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 TRAV21A0A0B4J279 112 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 SMIM9A6NGZ8 99 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 C9JCJ5 164 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 GCGP01275 180 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 GNG4P50150 75 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 ZNF80P51504 273 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-205ENST00000526954 CENPWQ5EE01 88 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 ZC2HC1AQ96GY0 325 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 LINC01587Q99440 93 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 PYGO2Q9BRQ0 406 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 TMEM208Q9BTX3 173 aa11.96□□□□□ -0.49
CAPN1-205ENST00000526954 HUWE1Q7Z6Z7 4374 aaKnown RBP11.95□□□□□ -0.5
CAPN1-205ENST00000526954 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
CAPN1-205ENST00000526954 PFN1P07737 140 aaKnown RBP11.95□□□□□ -0.5
CAPN1-205ENST00000526954 Q6ZQT7 251 aa11.95□□□□□ -0.5
CAPN1-205ENST00000526954 COL7A1Q02388 2944 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 IGHV3OR16-12A0A075B7B8 117 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 MIFP14174 115 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 CRIP1P50238 77 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 CEBPGP53567 150 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 ZNF674Q2M3X9 581 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 FAM74A3Q4VXF1 159 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 EIF4E3Q8N5X7 224 aaKnown RBP11.94□□□□□ -0.5
CAPN1-205ENST00000526954 NHLRC2Q8NBF2 726 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 LY96Q9Y6Y9 160 aa11.94□□□□□ -0.5
CAPN1-205ENST00000526954 FAM162BQ5T6X4 162 aa11.93□□□□□ -0.5
CAPN1-205ENST00000526954 SMIM7Q9BQ49 75 aa11.93□□□□□ -0.5
CAPN1-205ENST00000526954 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 RRN3P1Q2M238 152 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 TDRG1Q3Y452 100 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 COMMD7Q86VX2 200 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 Q8NAQ8 132 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
CAPN1-205ENST00000526954 PGPEP1LA6NFU8 196 aa11.91□□□□□ -0.5
CAPN1-205ENST00000526954 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-205ENST00000526954 SH2D1AO60880 128 aa11.91□□□□□ -0.5
CAPN1-205ENST00000526954 ANXA2RQ3ZCQ2 193 aa11.91□□□□□ -0.5
CAPN1-205ENST00000526954 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
CAPN1-205ENST00000526954 BIN3Q9NQY0 253 aa11.91□□□□□ -0.5
CAPN1-205ENST00000526954 C11orf21Q9P2W6 132 aa11.91□□□□□ -0.5
CAPN1-205ENST00000526954 PRM2P04554 102 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 AZU1P20160 251 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 MUC21Q5SSG8 566 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 FAM159AQ6UWV7 190 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 KCNS1Q96KK3 526 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 U3KQK5 164 aa11.9□□□□□ -0.5
CAPN1-205ENST00000526954 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
CAPN1-205ENST00000526954 TMEM189A5PLL7 270 aa11.89□□□□□ -0.51
CAPN1-205ENST00000526954 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
CAPN1-205ENST00000526954 MGST1P10620 155 aaKnown RBP11.89□□□□□ -0.51
CAPN1-205ENST00000526954 HTN1P15515 57 aa11.89□□□□□ -0.51
CAPN1-205ENST00000526954 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
CAPN1-205ENST00000526954 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
CAPN1-205ENST00000526954 C16orf74Q96GX8 76 aa11.89□□□□□ -0.51
CAPN1-205ENST00000526954 C11orf68Q9H3H3 251 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms