RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 HRCT1Q6UXD1 115 aa8.77□□□□□ -1.01
VPS11-202ENST00000526829 MLST8Q9BVC4 326 aa8.77□□□□□ -1.01
VPS11-202ENST00000526829 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
VPS11-202ENST00000526829 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 NDUFA7O95182 113 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 SLC25A5P05141 298 aaKnown RBP8.76□□□□□ -1.01
VPS11-202ENST00000526829 RPL30P62888 115 aaKnown RBP8.76□□□□□ -1.01
VPS11-202ENST00000526829 KIR3DS1Q14943 382 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 ETDBQ3ZM63 59 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 EBLN2Q6P2I7 272 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 TREML4Q6UXN2 200 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 ZNF841Q6ZN19 808 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 C9orf139Q6ZV77 190 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 MGST2Q99735 147 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
VPS11-202ENST00000526829 MPC1Q9Y5U8 109 aa8.76□□□□□ -1.01
VPS11-202ENST00000526829 C2orf70A6NJV1 201 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 Q56UQ5 140 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 CENPWQ5EE01 88 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 DGAT2L7PQ6IED9 249 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 TPRX1Q8N7U7 411 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 OR10J6PQ8NGY7 276 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 RNF7Q9UBF6 113 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 CMYA5Q8N3K9 4069 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 TRAV40A0A0B4J280 105 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 TEX22C9J3V5 150 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 NPIPB6E9PJ23 425 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 IGHV4-38-2P0DP08 117 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 MIC13Q5XKP0 118 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 TMEM200BQ69YZ2 307 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 SCRT2Q9NQ03 307 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 ZNF331Q9NQX6 463 aaPredicted RBP8.75□□□□□ -1.01
VPS11-202ENST00000526829 TCF19Q9Y242 345 aa8.75□□□□□ -1.01
VPS11-202ENST00000526829 C17orf98A8MV24 154 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 J3QT63 122 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 SPINK4O60575 86 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 BRWD1-AS2P59051 145 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 PRELID3AQ96N28 172 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 RABAC1Q9UI14 185 aa8.74□□□□□ -1.01
VPS11-202ENST00000526829 PRSS46E5RG02 174 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 CRXO43186 299 aaPredicted RBP8.73□□□□□ -1.01
VPS11-202ENST00000526829 APOMO95445 188 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 CA6P23280 308 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 HES1Q14469 280 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 FAM201AQ5SY85 155 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 Q5XG85 94 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 PQLC2Q6ZP29 291 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 TMEM167BQ9NRX6 74 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 SPINK9Q5DT21 86 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 LYPD2Q6UXB3 125 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 Q8IYB0 196 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 TNFRSF19Q9NS68 423 aa8.73□□□□□ -1.01
VPS11-202ENST00000526829 LSM4Q9Y4Z0 139 aaKnown RBP8.73□□□□□ -1.01
VPS11-202ENST00000526829 SRRM5B3KS81 715 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 GGTLC3B5MD39 225 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
VPS11-202ENST00000526829 GRPP07492 148 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 INSL3P51460 131 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 DEFB112Q30KQ8 113 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
VPS11-202ENST00000526829 UBALD1Q8TB05 177 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 ARPC1AQ92747 370 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 SPANXDQ9BXN6 97 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 A0A087X0K7 114 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 IGLV2-8P01709 118 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 GCSHP23434 173 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 HERVK_113P63121 156 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 FXYD3Q14802 87 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 BRD3OSQ6XYD6 125 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 BPIFA4PQ86YQ2 179 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 RETNQ9HD89 108 aa8.72□□□□□ -1.01
VPS11-202ENST00000526829 H3BMG7 143 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 NMUP48645 174 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 FHL3Q13643 280 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 GAGE13Q4V321 117 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 GOLT1AQ6ZVE7 132 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
VPS11-202ENST00000526829 ABHD12Q8N2K0 398 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 KIR2DL4Q99706 377 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 JPT2Q9H910 190 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 C21orf62Q9NYP8 219 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 PRO0461Q9UI25 63 aa8.71□□□□□ -1.02
VPS11-202ENST00000526829 TGP01266 2768 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 TMEM30CPA0ZSE6 113 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 Q6YL49 198 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 STPG3Q8N7X2 389 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 SSMEM1Q8WWF3 244 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 IGF2BP2-AS1Q96M15 143 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 SELENOKQ9Y6D0 94 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 SNCGO76070 127 aa8.7□□□□□ -1.02
VPS11-202ENST00000526829 IGHV3-7P01780 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms