RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 GAGE12BA1L429 117 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 GAGE7O76087 117 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 GAGE12FP0CL80 117 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 GAGE12GP0CL81 117 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 GAGE12IP0CL82 117 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 Q6ZTI0 123 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 FAM167A-AS1Q96KT0 104 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 TMPRSS5Q9H3S3 457 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 PPP1R14DQ9NXH3 145 aa9.77□□□□□ -0.85
CPSF1-201ENST00000526271 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 H3BQ15 152 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 H7BYZ3 331 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 CT45A10P0DMU9 189 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 AKR1C8PQ5T2L2 129 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 EIF5AL1Q6IS14 154 aaKnown RBP9.76□□□□□ -0.85
CPSF1-201ENST00000526271 FAM122CQ6P4D5 195 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 TMED6Q8WW62 240 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 SAT2Q96F10 170 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-201ENST00000526271 SLC25A2Q9BXI2 301 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 TMEM14CQ9P0S9 112 aa9.76□□□□□ -0.85
CPSF1-201ENST00000526271 A0A1W2PPV4 95 aa9.75□□□□□ -0.85
CPSF1-201ENST00000526271 IGLC2P0DOY2 106 aa9.75□□□□□ -0.85
CPSF1-201ENST00000526271 LYPD1Q8N2G4 141 aa9.75□□□□□ -0.85
CPSF1-201ENST00000526271 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
CPSF1-201ENST00000526271 PHYHIPLQ96FC7 376 aa9.75□□□□□ -0.85
CPSF1-201ENST00000526271 ACTR3CQ9C0K3 210 aaPredicted RBP9.75□□□□□ -0.85
CPSF1-201ENST00000526271 EPM2AB3EWF7 344 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 H3BNG1 76 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 J3KRW8 73 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 STAG3L2P0CL84 134 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 STAG3L3P0CL85 134 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 CDC34P49427 236 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-201ENST00000526271 SULT1A2P50226 295 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 TAS2R45P59539 299 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 ZNF726P1Q15940 193 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 DPPA3Q6W0C5 159 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 Q6ZQT7 251 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 RAB24Q969Q5 203 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 C20orf144Q9BQM9 153 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 OR51M1Q9H341 326 aa9.74□□□□□ -0.85
CPSF1-201ENST00000526271 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
CPSF1-201ENST00000526271 DNAH10OSP0CZ25 163 aa9.73□□□□□ -0.85
CPSF1-201ENST00000526271 RAB5CP51148 216 aa9.73□□□□□ -0.85
CPSF1-201ENST00000526271 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
CPSF1-201ENST00000526271 FXYD5Q96DB9 178 aa9.73□□□□□ -0.85
CPSF1-201ENST00000526271 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 EIF3GO75821 320 aaKnown RBP eCLIP9.72□□□□□ -0.85
CPSF1-201ENST00000526271 INAFM2P0DMQ5 153 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 PYYP10082 97 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 HIST1H1EP10412 219 aaKnown RBP9.72□□□□□ -0.85
CPSF1-201ENST00000526271 FHITP49789 147 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 GUK1Q16774 197 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 KHDC3LQ587J8 217 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 SUN5Q8TC36 379 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
CPSF1-201ENST00000526271 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.86
CPSF1-201ENST00000526271 HMGB3O15347 200 aaKnown RBP9.71□□□□□ -0.86
CPSF1-201ENST00000526271 DAZ2Q13117 558 aaKnown RBP9.71□□□□□ -0.86
CPSF1-201ENST00000526271 Q5VSD8 79 aa9.71□□□□□ -0.86
CPSF1-201ENST00000526271 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.86
CPSF1-201ENST00000526271 SLC50A1Q9BRV3 221 aa9.71□□□□□ -0.86
CPSF1-201ENST00000526271 GSN-AS1Q9NRJ2 163 aa9.71□□□□□ -0.86
CPSF1-201ENST00000526271 LRP1Q07954 4544 aaKnown RBP9.7□□□□□ -0.86
CPSF1-201ENST00000526271 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 OR7C2O60412 319 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 ZNF253O75346 499 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 ZNF324O75467 553 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-201ENST00000526271 CXorf1O96002 111 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 NBEAP1P0C6P0 100 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 PRR9Q5T870 116 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 TEX261Q6UWH6 196 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 ALKAL2Q6UX46 152 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 FAM213BQ8TBF2 198 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 C18orf15Q96N68 181 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 KLF12Q9Y4X4 402 aa9.7□□□□□ -0.86
CPSF1-201ENST00000526271 M0R3E3 92 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 NDUFB4O95168 129 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 OR10J4P0C629 311 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 ARL14EPLP0DKL9 152 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 GCHFRP30047 84 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 HAMPP81172 84 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 ERCC8Q13216 396 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 PDE6HQ13956 83 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 FAM74A1Q5RGS3 127 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 TP53TG3Q9ULZ0 132 aa9.69□□□□□ -0.86
CPSF1-201ENST00000526271 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 MAP1LC3B2A6NCE7 125 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 SNURFLB1AK76 121 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 KLLNB2CW77 178 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 SIVA1O15304 175 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 NXPH4O95158 308 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 H2AFB1P0C5Y9 115 aa9.68□□□□□ -0.86
CPSF1-201ENST00000526271 BTN1A1Q13410 526 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms