RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 Q6ZTI0 123 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 ARPINQ7Z6K5 226 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 ATP6V0E2Q8NHE4 81 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 TMEM254Q8TBM7 123 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 MUCL1Q96DR8 90 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 CYYR1Q96J86 154 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 MRPL57Q9BQC6 102 aaKnown RBP1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 SEC11CQ9BY50 192 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 TRPM3Q9HCF6 1732 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 RPRMQ9NS64 109 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 CCL26Q9Y258 94 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 ZNF646O15015 1829 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 PIK3C2AO00443 1686 aa1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 CDK13Q14004 1512 aaKnown RBP1.7□□□□□ -2.14
TRAPPC4-207ENST00000526141 A2ML1A8K2U0 1454 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 ZNF106Q9H2Y7 1883 aaKnown RBP1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 TNS1Q9HBL0 1735 aaKnown RBP1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 DIP2AQ14689 1571 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 NWD1Q149M9 1564 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 TRAV12-1A0A0B4J245 112 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 PITX3O75364 302 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 KLF7O75840 302 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 CTSGP08311 255 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 ASAH2BP0C7U1 165 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 GKN2Q86XP6 184 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 SNX29P2Q8IUI4 249 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 LINC00269Q8N2A0 174 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 C9orf163Q8N9P6 203 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 TAS2R8Q9NYW2 309 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 SERP1Q9Y6X1 66 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 IQGAP1P46940 1657 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 EFCAB5A4FU69 1503 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 WDR90Q96KV7 1748 aa1.69□□□□□ -2.14
TRAPPC4-207ENST00000526141 ATRXP46100 2492 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 NUP214P35658 2090 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 DENND4CQ5VZ89 1909 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 MYOM1P52179 1685 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 RREB1Q92766 1687 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 ITSN2Q9NZM3 1697 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 ZNF609O15014 1411 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 C3orf85A0A1B0GTC6 90 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 GEMIN2O14893 280 aaKnown RBP1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 CATR1Q13166 79 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 DEFB113Q30KQ7 82 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 MIC13Q5XKP0 118 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 MRPL54Q6P161 138 aaKnown RBP1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 FAM19A2Q8N3H0 131 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 SMIM7Q9BQ49 75 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 NOP16Q9Y3C1 178 aaKnown RBP1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 CHCHD2Q9Y6H1 151 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 KIF14Q15058 1648 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 ABCA6Q8N139 1617 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 ZNF407Q9C0G0 2248 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 DOCK4Q8N1I0 1966 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 NUP188Q5SRE5 1749 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 NALCNQ8IZF0 1738 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 RAPGEF2Q9Y4G8 1499 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 DIP2CQ9Y2E4 1556 aa1.68□□□□□ -2.14
TRAPPC4-207ENST00000526141 NUP205Q92621 2012 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 CLTCQ00610 1675 aaKnown RBP1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 MAST2Q6P0Q8 1798 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 MAP3K1Q13233 1512 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 ERICH3Q5RHP9 1530 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 BIVM-ERCC5R4GMW8 1640 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 SPHKAPQ2M3C7 1700 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 IGKV3D-11A0A0A0MRZ8 115 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 TRAV10A0A0B4J240 114 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 LOC107984156A0A0G2JMH3 177 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 TCRBV4S1A1TA0A5B7 111 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 MCRIP1C9JLW8 97 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 C5orf67F2Z3F1 127 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 J3QLW9 94 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 APOC4-APOC2K7ER74 178 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 ERC2-IT1O76042 136 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 IGLV6-57P01721 117 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 APOC2P02655 101 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 RPL26P61254 145 aaKnown RBP1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 NCMAPQ5T1S8 102 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 PRR9Q5T870 116 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 C2orf82Q6UX34 121 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 ARL17AQ8IVW1 177 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 VSTM2AQ8TAG5 236 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 LINC00526Q96FQ7 95 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 KTN1Q86UP2 1357 aaKnown RBP1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 MYOM2P54296 1465 aa1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 COL4A4P53420 1690 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC4-207ENST00000526141 RTEL1-TNFRSF6BF6WH68 1400 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 DISP1Q96F81 1524 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 MARF1Q9Y4F3 1742 aaKnown RBP1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 E7EQL1 145 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 EDF1O60869 148 aaKnown RBP1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 IFITM1P13164 125 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 COL5A1-AS1Q5SY13 56 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 Q6AWC8 147 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 OR2T2Q6IF00 324 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 CASC2Q6XLA1 102 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 SVBPQ8N300 66 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 SFT2D1Q8WV19 159 aa1.66□□□□□ -2.14
TRAPPC4-207ENST00000526141 CCDC88BA6NC98 1476 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms