RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 AZU1P20160 251 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 TSPOP30536 169 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 CDKN1BP46527 198 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 SULT1A2P50226 295 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 DAD1P61803 113 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 GCSAMLQ5JQS6 135 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 FAM210BQ96KR6 192 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 AQP10Q96PS8 301 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 LINC01587Q99440 93 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 PLAC8L1A1L4L8 177 aa7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 LYRM9A8MSI8 78 aa7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 M0R036 132 aa7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 HTN3P15516 51 aa7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 CLINT1Q14677 625 aa7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 RHEBQ15382 184 aa7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 PARD6GQ9BYG4 376 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC4-204ENST00000524797 TRBV19A0A075B6N1 114 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 PYYP10082 97 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 HOXA5P20719 270 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 AKR1C3P42330 323 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 DMRTA1Q5VZB9 504 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 MRPL53Q96EL3 112 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 C20orf144Q9BQM9 153 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 WDR61Q9GZS3 305 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 NPIPB6E9PJ23 425 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 NDUFB4O95168 129 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 P0DMU3 169 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 FAM231AP0DMU4 169 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 FAM231CP0DMU5 169 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 GAGE1Q13065 139 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 MIR17HGQ75NE6 70 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 FAM167A-AS1Q96KT0 104 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 SLC25A2Q9BXI2 301 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 KCNIP2Q9NS61 270 aa7.91□□□□□ -1.14
TRAPPC4-204ENST00000524797 C9JQL5 133 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 CT45A10P0DMU9 189 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 LEPP41159 167 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 GFI1BQ5VTD9 330 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 POM121L12Q8N7R1 296 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 ISOC2Q96AB3 205 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 C16orf74Q96GX8 76 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 ATP5SQ99766 215 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 TIMM9Q9Y5J7 89 aa7.9□□□□□ -1.14
TRAPPC4-204ENST00000524797 M0R3E3 92 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 PDE6HQ13956 83 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 PYY3Q5JQD4 70 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 BLNKQ8WV28 456 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 MRPL32Q9BYC8 188 aaKnown RBP7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.15
TRAPPC4-204ENST00000524797 NACAE9PAV3 2078 aa7.89□□□□□ -1.15
TRAPPC4-204ENST00000524797 C17orf112F2Z3M2 114 aa7.89□□□□□ -1.15
TRAPPC4-204ENST00000524797 H7BYZ3 331 aa7.89□□□□□ -1.15
TRAPPC4-204ENST00000524797 RPL7L1Q6DKI1 246 aaKnown RBP7.89□□□□□ -1.15
TRAPPC4-204ENST00000524797 ZNF493Q6ZR52 646 aa7.89□□□□□ -1.15
TRAPPC4-204ENST00000524797 TSTD3H0UI37 97 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 J3KRW8 73 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 HTN1P15515 57 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 RPL12P30050 165 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 PKIAP61925 76 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 ERCC8Q13216 396 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 EXOC3-AS1Q8N2X6 119 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 RNASE8Q8TDE3 154 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 TMEM263Q8WUH6 116 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 SMIM3Q9BZL3 60 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 FUT9Q9Y231 359 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 UMAD1C9J7I0 102 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 NDUFA6P56556 154 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 ICAM4Q14773 271 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 FXYD5Q96DB9 178 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 PAXXQ9BUH6 204 aa7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 EIF5A2Q9GZV4 153 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-204ENST00000524797 TRAV12-3A0A0B4J271 114 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 IFNA5P01569 189 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 NBEAP1P0C6P0 100 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 DDTP30046 118 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 RPS10P46783 165 aaKnown RBP7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 FFAR4Q5NUL3 377 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 WDR73Q6P4I2 378 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 UBE2DNLQ8IWF7 75 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 SCGB1C1Q8TD33 95 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 FAM19A4Q96LR4 140 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 LINC00477Q96M19 166 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 AGPAT4-IT1Q9H0P7 198 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 AAMDCQ9H7C9 122 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 WFDC1Q9HC57 220 aa7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC4-204ENST00000524797 CBY3A6NI87 242 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 C9orf47Q6ZRZ4 202 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 NOP10Q9NPE3 64 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 IGKV2-40A0A087WW87 121 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 C7orf71A4D174 169 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 F5H768 121 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms