RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TMSB15BA0A087X1C1 80 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 A0A1W2PRX2 142 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 PHOX2AO14813 284 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 Q0VG73 95 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 FHL3Q13643 280 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 OR2K2Q8NGT1 345 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 DLX4Q92988 240 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-212ENST00000524330 CITED2Q99967 270 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-212ENST00000524330 GPR61Q9BZJ8 451 aa7.52□□□□□ -1.21
VPS13B-212ENST00000524330 CSN3P07498 182 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 MED14OSP0DP75 135 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 S100A4P26447 101 aaKnown RBP7.51□□□□□ -1.21
VPS13B-212ENST00000524330 CTRLP40313 264 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 PROK1P58294 105 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 DMRTA1Q5VZB9 504 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 LYZL1Q6UWQ5 148 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 C18orf65Q6ZTR6 163 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 RAX2Q96IS3 184 aa7.51□□□□□ -1.21
VPS13B-212ENST00000524330 A0A0J9YX75 114 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 GZMBP10144 247 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 RNASE4P34096 147 aaKnown RBP7.5□□□□□ -1.21
VPS13B-212ENST00000524330 ASIPP42127 132 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 ZNF80P51504 273 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-212ENST00000524330 DEFB114Q30KQ6 69 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 APRG1Q8IVJ8 170 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 C11orf44Q8N8P7 122 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 UNC79Q9P2D8 2635 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
VPS13B-212ENST00000524330 PDZD2O15018 2839 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 ASH1LQ9NR48 2969 aaKnown RBP7.49□□□□□ -1.21
VPS13B-212ENST00000524330 C7orf71A4D174 169 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 AMBPP02760 352 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 PF4P02776 101 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 ARMS2P0C7Q2 107 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 IGLC6P0CF74 106 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 SMIM6P0DI80 62 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 SRIP30626 198 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 TWIST1Q15672 202 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 FAM159AQ6UWV7 190 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 ZNF493Q6ZR52 646 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 FAM19A4Q96LR4 140 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 NAGKQ9UJ70 344 aa7.49□□□□□ -1.21
VPS13B-212ENST00000524330 FLNAP21333 2647 aaKnown RBP7.48□□□□□ -1.21
VPS13B-212ENST00000524330 GRIFINA4D1Z8 144 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 KLLNB2CW77 178 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 PPBPP02775 128 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 OR5AL1P0C617 328 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 ZNF705DP0CH99 300 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-212ENST00000524330 ZNF705BP0CI00 300 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-212ENST00000524330 PRB4P10163 310 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-212ENST00000524330 CDKN1BP46527 198 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 SPANXN1Q5VSR9 72 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 Q71RC1 249 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-212ENST00000524330 ZFAND2AQ8N6M9 145 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 DUX3Q96PT4 197 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 SAMD10Q9BYL1 202 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 TEX15Q9BXT5 2789 aa7.48□□□□□ -1.21
VPS13B-212ENST00000524330 LOC102724200A0A096LPH7 203 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-212ENST00000524330 F6UB75 175 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 J3KRW8 73 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 FABP4P15090 132 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 RAB4AP20338 218 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 EDN2P20800 178 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 DEFB131AP59861 70 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 SLAQ13239 276 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 KIAA1644Q3SXP7 199 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 DNLZQ5SXM8 178 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 TMEM61Q8N0U2 210 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-212ENST00000524330 CNFNQ9BYD5 112 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 TMEM191AQ9H0A3 160 aa7.47□□□□□ -1.21
VPS13B-212ENST00000524330 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 IGKV3D-20A0A0C4DH25 116 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 OR11H12B2RN74 326 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 SNAI2O43623 268 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 SAP30O75446 220 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 HSBP1O75506 76 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 ESDP10768 282 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 HLA-DRB4P13762 266 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 CD33P20138 364 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 PMCHP20382 165 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 NTF3P20783 257 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 NUTF2P61970 127 aaKnown RBP7.46□□□□□ -1.22
VPS13B-212ENST00000524330 CD300EQ496F6 205 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-212ENST00000524330 PDZD11Q5EBL8 140 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 FAM104BQ5XKR9 115 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 ADAMTSL5Q6ZMM2 481 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 CLUHP3Q96NS8 147 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 C20orf144Q9BQM9 153 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 ALKBH7Q9BT30 221 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-212ENST00000524330 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-212ENST00000524330 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 PHLDA3Q9Y5J5 127 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms