RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SEC11AP67812 179 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 ATP5G2Q06055 141 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 C18orf15Q96N68 181 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 HIF1ANQ9NWT6 349 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 CELSR1Q9NYQ6 3014 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 C9orf47Q6ZRZ4 202 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 TMEM219Q86XT9 240 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 IGHV7-4-1A0A0J9YVY3 117 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 C7orf71A4D174 169 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 SIVA1O15304 175 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 TRGV3P03979 118 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 OR9G4Q8NGQ1 327 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 CHD8Q9HCK8 2581 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 NCOR2Q9Y618 2525 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 TRAV41A0A0B4J266 112 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 A1L4Q6 167 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 C19orf54Q5BKX5 351 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 Q8N8P6 123 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 ATP6V0BQ99437 205 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 PEF1Q9UBV8 284 aaKnown RBP8.48□□□□□ -1.05
HDAC9-228ENST00000524023 LINC00527Q9UJ94 153 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 MOB4Q9Y3A3 225 aa8.48□□□□□ -1.05
HDAC9-228ENST00000524023 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
HDAC9-228ENST00000524023 RBX1P62877 108 aa8.47□□□□□ -1.05
HDAC9-228ENST00000524023 LY6DQ14210 128 aa8.47□□□□□ -1.05
HDAC9-228ENST00000524023 Q6ZQT7 251 aa8.47□□□□□ -1.05
HDAC9-228ENST00000524023 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
HDAC9-228ENST00000524023 ZMAT4Q9H898 229 aa8.47□□□□□ -1.05
HDAC9-228ENST00000524023 IGHV3OR16-10A0A075B7F0 116 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 FAM223BA6NKX1 122 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 UQCRFS1P47985 274 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 NMUP48645 174 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 CRIP2P52943 208 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-228ENST00000524023 ODF1Q14990 250 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 ADAMTSL5Q6ZMM2 481 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 OR2K2Q8NGT1 345 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 PIFOQ8TCI5 191 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 GLMPQ8WWB7 406 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 ITLN2Q8WWU7 325 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-228ENST00000524023 TMEM158Q8WZ71 300 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 C16orf92Q96LL3 132 aa8.46□□□□□ -1.05
HDAC9-228ENST00000524023 C19orf84I3L1E1 186 aa8.46□□□□□ -1.06
HDAC9-228ENST00000524023 HSD52Q0P140 79 aa8.46□□□□□ -1.06
HDAC9-228ENST00000524023 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
HDAC9-228ENST00000524023 OR4X2Q8NGF9 303 aa8.46□□□□□ -1.06
HDAC9-228ENST00000524023 IGHV4-4A0A075B6R2 117 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 A6NDN8 102 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 IGHV4-39P01824 125 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 PRSS1P07477 247 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 PRR9Q5T870 116 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 C9orf139Q6ZV77 190 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 NRACQ8N912 160 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 C20orf173Q96LM9 149 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 COL25A1Q9BXS0 654 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-228ENST00000524023 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 IGHV1-69DA0A0B4J2H0 117 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 IGHV1-69P01742 117 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 ARL3P36405 182 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 PSMG4Q5JS54 123 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 UFC1Q9Y3C8 167 aa8.45□□□□□ -1.06
HDAC9-228ENST00000524023 TRAV26-2A0A0B4J265 109 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 H3BRM9 83 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 SPANXN1Q5VSR9 72 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 BRD3OSQ6XYD6 125 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 FOXC2Q99958 501 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 IGKV2D-26A0A0A0MRZ7 120 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 H3BVH4 76 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 IGKCP01834 107 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 SMIM17P0DL12 118 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 UNQ9165/PRO28630Q6UXU0 137 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 GPHB5Q86YW7 130 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 SMPXQ9UHP9 88 aa8.44□□□□□ -1.06
HDAC9-228ENST00000524023 SPTAN1Q13813 2472 aaKnown RBP8.43□□□□□ -1.06
HDAC9-228ENST00000524023 ATP5LO75964 103 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 TRBV12-3P01733 135 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 IGF1P05019 195 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 CDKN1BP46527 198 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 LAGE3Q14657 143 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 KIR3DS1Q14943 382 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 MEGF9Q9H1U4 602 aa8.43□□□□□ -1.06
HDAC9-228ENST00000524023 TRAV40A0A0B4J280 105 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 NDUFA4O00483 81 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 LINC00477Q96M19 166 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-228ENST00000524023 SOCS3O14543 225 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 DPM2O94777 84 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 AP1S3Q96PC3 154 aa8.42□□□□□ -1.06
HDAC9-228ENST00000524023 GAGE12BA1L429 117 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 TMEM8BA6NDV4 472 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 GAGE10A6NGK3 116 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 J3KRW8 73 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 ZFAND2AQ8N6M9 145 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms