RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 CCL16O15467 120 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 IGKV1D-12P01611 117 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 ACYP1P07311 99 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 CXCL8P10145 99 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 PTHLHP12272 177 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 RPL18Q07020 188 aaKnown RBP4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 INSL4Q14641 139 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 LPAL2Q16609 132 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 CEMP1Q6PRD7 247 aaPredicted RBP4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 PATE2Q6UY27 113 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 NFE4Q86UQ8 179 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 PDPNQ86YL7 162 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 DAND5Q8N907 189 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 OR8B2Q96RD0 313 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 SCRT1Q9BWW7 348 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 XAGE1AQ9HD64 81 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 NXT2Q9NPJ8 142 aaKnown RBP4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 TRPM2O94759 1503 aa4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 SIPA1L3O60292 1781 aaPredicted RBP4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 COL5A3P25940 1745 aaPredicted RBP4.03□□□□□ -1.76
EFCAB13-213ENST00000523978 EIF2AK4Q9P2K8 1649 aaKnown RBP4.03□□□□□ -1.77
EFCAB13-213ENST00000523978 IGHV4-4A0A075B6R2 117 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 TRAV14DV4A0A0A6YYC5 116 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 NDUFC1O43677 76 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 LY6G6DO95868 133 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 IGKV1-16P04430 117 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 ASAH2BP0C7U1 165 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 CKS2P33552 79 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 GNB1P62873 340 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 CASC10Q5T4H9 136 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 NOXRED1Q6NXP6 359 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 MIR17HGQ75NE6 70 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 ODF3Q96PU9 254 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 FGFBP2Q9BYJ0 223 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 CST11Q9H112 138 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 CXCL16Q9H2A7 254 aa4.02□□□□□ -1.77
EFCAB13-213ENST00000523978 TICRRQ7Z2Z1 1910 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 IGHV3OR16-10A0A075B7F0 116 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 IGHV3-74A0A0B4J1X5 117 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 PIGBOS1A0A0B4J2F0 54 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 A6NN06 94 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 KRTAP16-1A8MUX0 517 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 F2Z2F3 143 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 C3orf84H3BNL1 204 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 J3QLW9 94 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 CCKP06307 115 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 COX8AP10176 69 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 PIPP12273 146 aaPredicted RBP4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 CYCSP99999 105 aaKnown RBP4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 EGFEM1PQ0D2K5 195 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 CLDND2Q8NHS1 167 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 CCL4L1Q8NHW4 92 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 MANBALQ9NQG1 85 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 ATG2BQ96BY7 2078 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 CRYBG1Q9Y4K1 1723 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 TRPM7Q96QT4 1865 aa4.01□□□□□ -1.77
EFCAB13-213ENST00000523978 IQGAP1P46940 1657 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 CLTCQ00610 1675 aaKnown RBP4□□□□□ -1.77
EFCAB13-213ENST00000523978 LEPROTO15243 131 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 IGKV1-39P01597 117 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 IGKV1D-39P04432 117 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 RPL27AP46776 148 aaKnown RBP4□□□□□ -1.77
EFCAB13-213ENST00000523978 UBE2G1P62253 170 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 SOSTDC1Q6X4U4 206 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 ZNF497Q6ZNH5 498 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 KRTAP7-1Q8IUC3 87 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 NUP37Q8NFH4 326 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 ATXN7L3BQ96GX2 97 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 CSAG2Q9Y5P2 127 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 SHPRHQ149N8 1683 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 USP54Q70EL1 1684 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 NUP98P52948 1817 aa4□□□□□ -1.77
EFCAB13-213ENST00000523978 FER1L5A0AVI2 2057 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 OBSL1O75147 1896 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 NUP188Q5SRE5 1749 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 C3orf79P0CE67 100 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 REG3GQ6UW15 175 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 ZFP2Q6ZN57 461 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 C2orf91Q6ZV80 131 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 SCGB3A1Q96QR1 104 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 B9D2Q9BPU9 175 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 AGLP35573 1532 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 ANAPC1Q9H1A4 1944 aa3.99□□□□□ -1.77
EFCAB13-213ENST00000523978 SCN8AQ9UQD0 1980 aa3.98□□□□□ -1.77
EFCAB13-213ENST00000523978 ARHGEF5Q12774 1597 aa3.98□□□□□ -1.77
EFCAB13-213ENST00000523978 PDE4DIPQ5VU43 2346 aa3.98□□□□□ -1.77
EFCAB13-213ENST00000523978 ALS2Q96Q42 1657 aa3.98□□□□□ -1.77
EFCAB13-213ENST00000523978 IGHV4-30-2A0A087WSY4 118 aa3.98□□□□□ -1.77
EFCAB13-213ENST00000523978 TRBV6-7A0A0A0MS04 114 aa3.98□□□□□ -1.77
EFCAB13-213ENST00000523978 IGKV1-6A0A0C4DH72 117 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms