RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 C19orf71A6NCJ1 209 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 IGLV3-27P01718 113 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 LINC00205P59089 165 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 RBMY1FQ15415 496 aaKnown RBP4.92□□□□□ -1.62
SDC2-208ENST00000523877 TWIST1Q15672 202 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 C9orf57Q5W0N0 161 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 SLC48A1Q6P1K1 146 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 RITA1Q96K30 269 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 SIP14410 1827 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 KIAA1671Q9BY89 1806 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 ANKRD12Q6UB98 2062 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 TMSB15BA0A087X1C1 80 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 IGKV1-9A0A0C4DH69 117 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 RHOHQ15669 191 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 GPHB5Q86YW7 130 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 RNASE6Q93091 150 aaKnown RBP4.91□□□□□ -1.62
SDC2-208ENST00000523877 CYSTM1Q9H1C7 97 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
SDC2-208ENST00000523877 XCL2Q9UBD3 114 aa4.91□□□□□ -1.62
SDC2-208ENST00000523877 C9JCJ5 164 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 J3QRE1 110 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 S100A3P33764 101 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 RPS21P63220 83 aaKnown RBP4.9□□□□□ -1.63
SDC2-208ENST00000523877 FHL2Q14192 279 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 C11orf71Q6IPW1 123 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 SDIM1Q6ZPB5 146 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 Q6ZRM9 215 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 PRSS33Q8NF86 280 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 WFDC5Q8TCV5 224 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 DYNLRB2Q8TF09 96 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 HIST1H4GQ99525 98 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 TNFRSF12AQ9NP84 129 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 TIMM9Q9Y5J7 89 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 PTPRBP23467 1997 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 OBSL1O75147 1896 aa4.9□□□□□ -1.63
SDC2-208ENST00000523877 DOCK9Q9BZ29 2069 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 TRAV13-2A0A0B4J235 113 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 CTXND1A0A1B0GTU2 59 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 J3QLW9 94 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 LTAP01374 205 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 PRM2P04554 102 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 LMO2P25791 158 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 FXYD6P3P58550 94 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 LMO4P61968 165 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 Q1T7F1 81 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 C1orf100Q5SVJ3 147 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 ZNF747Q9BV97 191 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 OSTCQ9NRP0 149 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 SPRR3Q9UBC9 169 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
SDC2-208ENST00000523877 BAZ2BQ9UIF8 2168 aaKnown RBP4.89□□□□□ -1.63
SDC2-208ENST00000523877 POLEQ07864 2286 aa4.89□□□□□ -1.63
SDC2-208ENST00000523877 RALGAPA2Q2PPJ7 1873 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 ANKRD36A6QL64 1941 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 C2orf16Q68DN1 1984 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 TRBV25-1A0A075B6N4 114 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 A0A0G2JRQ6 117 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 H7BZZ5 65 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 PEX7O00628 323 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 XCL1P47992 114 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 GNB1P62873 340 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 DYNLT1P63172 113 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 ESRGQ1W209 222 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.88□□□□□ -1.63
SDC2-208ENST00000523877 GFRALQ6UXV0 394 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 C16orf47Q6ZP98 133 aaPredicted RBP4.88□□□□□ -1.63
SDC2-208ENST00000523877 NDUFA11Q86Y39 141 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 CDH23Q9H251 3354 aa4.88□□□□□ -1.63
SDC2-208ENST00000523877 ARHGAP21Q5T5U3 1957 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 NUMA1Q14980 2115 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 IGLV3-10A0A075B6K4 115 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 TRBV7-3A0A075B6L6 115 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 C17orf51A8MQB3 221 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 C11orf94C9JXX5 98 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 E7EQL1 145 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 ZNHIT1O43257 154 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 PIRTP0C851 137 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 EGR2P11161 476 aaPredicted RBP4.87□□□□□ -1.63
SDC2-208ENST00000523877 CCL4P13236 92 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 RNASE4P34096 147 aaKnown RBP4.87□□□□□ -1.63
SDC2-208ENST00000523877 IFI27P40305 119 aaPredicted RBP4.87□□□□□ -1.63
SDC2-208ENST00000523877 UBE2D1P51668 147 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 KLKP1Q107X0 134 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 LINC00242Q5T6M2 205 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 SCXQ7RTU7 201 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 FAM216BQ8N7L0 139 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 LINC01555Q8NAE3 123 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 CHCHD10Q8WYQ3 142 aaPredicted RBP4.87□□□□□ -1.63
SDC2-208ENST00000523877 C11orf52Q96A22 123 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 PKD1L2Q7Z442 2459 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 ANAPC1Q9H1A4 1944 aa4.87□□□□□ -1.63
SDC2-208ENST00000523877 KIAA1549Q9HCM3 1950 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms