RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-222	ENST00000523530	FAM3B	P58499	235 aa	Predicted RBP	11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	OR2D3	Q8NGH3	330 aa		11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	MCRIP2	Q9BUT9	160 aa	Known RBP	11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	TENM1	Q9UKZ4	2725 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530		A0A1W2PPQ1	181 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	COLCA2	A8K830	154 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530		A8MWL6	223 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	GPX1	P07203	203 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	HLA-DRB4	P13762	266 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	LEP	P41159	167 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	ODF3L2	Q3SX64	289 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	CT83	Q5H943	113 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	APRG1	Q8IVJ8	170 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	FAM19A4	Q96LR4	140 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	YPEL4	Q96NS1	127 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	HLA-DRB4	X5D2U9	266 aa		11.95	□□□□□ -0.5
DENND3-222	ENST00000523530	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	CRISP2	P16562	243 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	TCL1A	P56279	114 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	ZNF124	Q15973	351 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	ZFAND2A	Q8N6M9	145 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	SPATA3	Q8NHX4	192 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	ODF3	Q96PU9	254 aa		11.94	□□□□□ -0.5
DENND3-222	ENST00000523530	FBN1	P35555	2871 aa	Known RBP	11.93	□□□□□ -0.5
DENND3-222	ENST00000523530	TMEM189	A5PLL7	270 aa		11.93	□□□□□ -0.5
DENND3-222	ENST00000523530	CXCL1	P09341	107 aa		11.93	□□□□□ -0.5
DENND3-222	ENST00000523530	BEAN1	Q3B7T3	259 aa		11.93	□□□□□ -0.5
DENND3-222	ENST00000523530	TSKU	Q8WUA8	353 aa		11.93	□□□□□ -0.5
DENND3-222	ENST00000523530	SMIM27	A0A1W2PRY6	76 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530		H3BMM0	161 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	ORM1	P02763	201 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	TSPO	P30536	169 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	RNASE4	P34096	147 aa	Known RBP	11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	RPL19	P84098	196 aa	Known RBP	11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	PRR9	Q5T870	116 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	BTF3L4	Q96K17	158 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	TRBV24-1	A0A075B6N3	115 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	TRAV21	A0A0B4J279	112 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	XKRY2	A2RUG3	117 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	WFDC9	Q8NEX5	89 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	FAM210B	Q96KR6	192 aa		11.92	□□□□□ -0.5
DENND3-222	ENST00000523530	TRAV9-1	A0A075B6T8	112 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	TMSB15B	A0A087X1C1	80 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	CD7	P09564	240 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	CDKN1B	P46527	198 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	STH	Q8IWL8	128 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	NEU1	Q99519	415 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	FAM110A	Q9BQ89	295 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	GFRA4	Q9GZZ7	299 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	NAT8B	Q9UHF3	227 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530	ATR	Q13535	2644 aa		11.91	□□□□□ -0.5
DENND3-222	ENST00000523530		A8MTW9	85 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	KLLN	B2CW77	178 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530		M0R2Z0	102 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	GZMB	P10144	247 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	IGLL1	P15814	213 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	RAB5A	P20339	215 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	RPS20	P60866	119 aa	Known RBP	11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	SPINK13	Q1W4C9	94 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	PYGO2	Q9BRQ0	406 aa		11.9	□□□□□ -0.5
DENND3-222	ENST00000523530	HIGD1C	A8MV81	97 aa		11.89	□□□□□ -0.51
DENND3-222	ENST00000523530	KIR3DS1	Q14943	382 aa		11.89	□□□□□ -0.51
DENND3-222	ENST00000523530	LINC01559	Q495D7	138 aa		11.89	□□□□□ -0.51
DENND3-222	ENST00000523530		Q6AWC8	147 aa		11.89	□□□□□ -0.51
DENND3-222	ENST00000523530	AMTN	Q6UX39	209 aa		11.89	□□□□□ -0.51
DENND3-222	ENST00000523530	TRAV12-2	A0A075B6T6	113 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	C7orf71	A4D174	169 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	FAM231B	A6NCW3	169 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	SPINK4	O60575	86 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	RPS10	P46783	165 aa	Known RBP	11.88	□□□□□ -0.51
DENND3-222	ENST00000523530		Q6ZQT7	251 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	GTSCR1	Q86UQ5	136 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	NAGK	Q9UJ70	344 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	AGRN	O00468	2067 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	TRAV12-3	A0A0B4J271	114 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	FXYD7	P58549	80 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	GFI1B	Q5VTD9	330 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	NUP35	Q8NFH5	326 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	GTSF1	Q8WW33	167 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	PGLYRP4	Q96LB8	373 aa		11.88	□□□□□ -0.51
DENND3-222	ENST00000523530	RBMY1B	A6NDE4	496 aa	Known RBP	11.87	□□□□□ -0.51
DENND3-222	ENST00000523530	RBMY1E	A6NEQ0	496 aa	Known RBP	11.87	□□□□□ -0.51
DENND3-222	ENST00000523530	RBMY1D	P0C7P1	496 aa	Known RBP	11.87	□□□□□ -0.51
DENND3-222	ENST00000523530	CLUHP3	Q96NS8	147 aa		11.87	□□□□□ -0.51
DENND3-222	ENST00000523530	TPPP3	Q9BW30	176 aa		11.87	□□□□□ -0.51
DENND3-222	ENST00000523530	C11orf21	Q9P2W6	132 aa		11.87	□□□□□ -0.51
DENND3-222	ENST00000523530	IGKV3D-20	A0A0C4DH25	116 aa		11.86	□□□□□ -0.51
DENND3-222	ENST00000523530	GRIFIN	A4D1Z8	144 aa		11.86	□□□□□ -0.51
DENND3-222	ENST00000523530	MRPL54	Q6P161	138 aa	Known RBP	11.86	□□□□□ -0.51
DENND3-222	ENST00000523530	TRPT1	Q86TN4	253 aa	Known RBP	11.86	□□□□□ -0.51
DENND3-222	ENST00000523530	WFDC10A	Q9H1F0	79 aa		11.86	□□□□□ -0.51
DENND3-222	ENST00000523530	C19orf73	Q9NVV2	129 aa		11.86	□□□□□ -0.51
DENND3-222	ENST00000523530	TYMS	P04818	313 aa		11.85	□□□□□ -0.51
DENND3-222	ENST00000523530	FOXA3	P55318	350 aa	Predicted RBP	11.85	□□□□□ -0.51
DENND3-222	ENST00000523530	MUC21	Q5SSG8	566 aa		11.85	□□□□□ -0.51
DENND3-222	ENST00000523530	BORCS7	Q96B45	105 aa		11.85	□□□□□ -0.51
DENND3-222	ENST00000523530	SRD5A3	Q9H8P0	318 aa		11.85	□□□□□ -0.51
DENND3-222	ENST00000523530	TMA7	Q9Y2S6	64 aa	Known RBP	11.85	□□□□□ -0.51
DENND3-222	ENST00000523530	NUTF2	P61970	127 aa	Known RBP	11.84	□□□□□ -0.51
DENND3-222	ENST00000523530	FAM159A	Q6UWV7	190 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms