RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ACTR3CQ9C0K3 210 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-235ENST00000522730 ZNF586Q9NXT0 402 aa7.19□□□□□ -1.26
CTNNA1-235ENST00000522730 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
CTNNA1-235ENST00000522730 A0A0J9YY99 117 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 A0A1W2PPV4 95 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 SNURFLB1AK76 121 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 LEPP41159 167 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 CCL18P55774 89 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 GUK1Q16774 197 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 SSX7Q7RTT5 188 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 RAB24Q969Q5 203 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 RYR1P21817 5038 aa7.18□□□□□ -1.26
CTNNA1-235ENST00000522730 TRAV26-1A0A087WT03 109 aa7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 CTXND1A0A1B0GTU2 59 aa7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 M0R3E3 92 aa7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 HMGB3O15347 200 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 PYYP10082 97 aa7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 RNASE4P34096 147 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 EXOC3-AS1Q8N2X6 119 aa7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 RNASE8Q8TDE3 154 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 SLC25A2Q9BXI2 301 aa7.17□□□□□ -1.26
CTNNA1-235ENST00000522730 DYNC1H1Q14204 4646 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 TRBV19A0A075B6N1 114 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 MAP1LC3B2A6NCE7 125 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 RGS13O14921 159 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 STAG3L2P0CL84 134 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 STAG3L3P0CL85 134 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 HIST1H1EP10412 219 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 FAM3BP58499 235 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 TAS2R45P59539 299 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 BLOC1S1P78537 153 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 KHDC3LQ587J8 217 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 PCNPQ8WW12 178 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 MBD3L1Q8WWY6 194 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 FAM167A-AS1Q96KT0 104 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 C20orf144Q9BQM9 153 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 MAP1LC3BQ9GZQ8 125 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 LINC00588Q9Y4M8 146 aa7.16□□□□□ -1.26
CTNNA1-235ENST00000522730 NBDYA0A0U1RRE5 68 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 OR7C2O60412 319 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 NDUFB4O95168 129 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 GPX1P07203 203 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 NMBP08949 121 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 ARL14EPLP0DKL9 152 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 MED14OSP0DP75 135 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 HOXA5P20719 270 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 FGF8P55075 233 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 ICAM4Q14773 271 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 Q6ZTI0 123 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 ZNF575Q86XF7 245 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 ZNRF2Q8NHG8 242 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 SFT2D1Q8WV19 159 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 ZNF503Q96F45 646 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 AGPAT4-IT1Q9H0P7 198 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 AAMDCQ9H7C9 122 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 GSN-AS1Q9NRJ2 163 aa7.15□□□□□ -1.26
CTNNA1-235ENST00000522730 DNAH11Q96DT5 4516 aa7.15□□□□□ -1.27
CTNNA1-235ENST00000522730 NACAE9PAV3 2078 aa7.15□□□□□ -1.27
CTNNA1-235ENST00000522730 TRGV2A0A075B6R0 118 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 IGKV2-40A0A087WW87 121 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 TRAV1-1A0A0B4J248 108 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 A0A1B0GV50 99 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 C7orf71A4D174 169 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 CXorf1O96002 111 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 IGKV2D-40P01614 121 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 SLC25A5P05141 298 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 RAB14P61106 215 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 BTN1A1Q13410 526 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 CLLU1Q5K131 121 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 PQLC2Q6ZP29 291 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 LINC00477Q96M19 166 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 PYGO2Q9BRQ0 406 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 PAXXQ9BUH6 204 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 OR51M1Q9H341 326 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 TMPRSS5Q9H3S3 457 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 Q9H8V8 135 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 TMEM14CQ9P0S9 112 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 PRELID1Q9Y255 219 aa7.14□□□□□ -1.27
CTNNA1-235ENST00000522730 TRGV1A0A0A0MS02 117 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 TEX46H3BTG2 121 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 ZNF253O75346 499 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 OR10J4P0C629 311 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 GCHFRP30047 84 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 UBE2L3P68036 154 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 CCL20P78556 96 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 TMEM78Q5T7P6 136 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 C6orf223Q8N319 242 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 LYPD6BQ8NI32 183 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 RXFP4Q8TDU9 374 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 FXYD5Q96DB9 178 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 MRPL53Q96EL3 112 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 ODF3Q96PU9 254 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 VGLL1Q99990 258 aa7.13□□□□□ -1.27
CTNNA1-235ENST00000522730 IGHV3-53P01767 116 aa7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 RANP62826 216 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 ESRGQ1W209 222 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms