RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 VAMP2P63027 116 aa10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 RAB31Q13636 194 aa10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 MRPL23Q16540 153 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 NEGR1Q7Z3B1 354 aa10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 PFDN5Q99471 154 aa10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 MSRB1Q9NZV6 116 aa10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 LSM5Q9Y4Y9 91 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-213ENST00000522504 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 UBE2L5PA0A1B0GUS4 154 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 C5orf51A6NDU8 294 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 E5RGE8 158 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 K7EQD1 137 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 RGS13O14921 159 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 SFTA3P0C7M3 94 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 MRPL32Q9BYC8 188 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 PRELID1Q9Y255 219 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
TRAPPC9-213ENST00000522504 TRAV9-2A0A087WT02 112 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 IGSF23A1L1A6 192 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 SIX6O95475 246 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 NMBP08949 121 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 SLAQ13239 276 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 PDE6HQ13956 83 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 FAM122CQ6P4D5 195 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 Q8TAT8 98 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 ZNF479Q96JC4 524 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 FAM167A-AS1Q96KT0 104 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 SLC25A2Q9BXI2 301 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 ZNF492Q9P255 531 aa10.28□□□□□ -0.76
TRAPPC9-213ENST00000522504 A0A1B0GVG6 124 aa10.27□□□□□ -0.77
TRAPPC9-213ENST00000522504 BAXQ07812 192 aa10.27□□□□□ -0.77
TRAPPC9-213ENST00000522504 CHAC2Q8WUX2 184 aa10.27□□□□□ -0.77
TRAPPC9-213ENST00000522504 UBR4Q5T4S7 5183 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 LRCOL1A6NCL2 159 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 GYPEP15421 78 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 FGF7P21781 194 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 SRIP30626 198 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 MIR17HGQ75NE6 70 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 IQCF2Q8IXL9 164 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 C2orf50Q96LR7 162 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 ARPC5LQ9BPX5 153 aa10.26□□□□□ -0.77
TRAPPC9-213ENST00000522504 CRYGDP07320 174 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 EVI2AP22794 236 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 SULT1A1P50225 295 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 H2BFSP57053 126 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 TMEM252Q8N6L7 170 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 LYRM2Q9NU23 88 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 FAM30AQ9NZY2 134 aa10.25□□□□□ -0.77
TRAPPC9-213ENST00000522504 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 LOC100131303A0A0U1RQF7 123 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 S100A11P31949 105 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 ZNF138P52744 262 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 IL15RAQ13261 267 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 Q6ZSN1 163 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 OR10G4Q8NGN3 311 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 AAMDCQ9H7C9 122 aa10.24□□□□□ -0.77
TRAPPC9-213ENST00000522504 IGLV5-52A0A0A0MRZ9 124 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 K7EP13 123 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 NBEAP1P0C6P0 100 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 S100A10P60903 97 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 RASL10AQ92737 203 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 TMEM70Q9BUB7 260 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 NPCDR1Q9BY65 106 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 NMES1Q9C002 83 aa10.23□□□□□ -0.77
TRAPPC9-213ENST00000522504 OR10J4P0C629 311 aa10.22□□□□□ -0.77
TRAPPC9-213ENST00000522504 CYCSP99999 105 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-213ENST00000522504 ZNF266Q14584 549 aa10.22□□□□□ -0.77
TRAPPC9-213ENST00000522504 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
TRAPPC9-213ENST00000522504 GIPP09681 153 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 RAB32Q13637 225 aa10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 TMEM183BQ1AE95 376 aa10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 LRRC37A5PQ49AS3 106 aa10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 TMEM183AQ8IXX5 376 aa10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 PCNPQ8WW12 178 aaKnown RBP10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 OR51M1Q9H341 326 aa10.21□□□□□ -0.77
TRAPPC9-213ENST00000522504 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 ORM1P02763 201 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 PVALBP20472 110 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 HBG1P69891 147 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 HBG2P69892 147 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 STX12Q86Y82 276 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 PPP1R1CQ8WVI7 109 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 ASB13Q8WXK3 278 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 SLC25A31Q9H0C2 315 aa10.2□□□□□ -0.78
TRAPPC9-213ENST00000522504 J3QL48 77 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 NHLH2Q02577 135 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 ATP6V1FQ16864 119 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 Q6AWC8 147 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 Q8N814 137 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 SPXQ9BT56 116 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms