RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NPYP01303 97 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 GTSF1LQ9H1H1 148 aa10.94□□□□□ -0.66
SYNPO-205ENST00000522122 IGHV2-70DA0A0C4DH43 119 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 CR1LQ2VPA4 569 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 RASL10AQ92737 203 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 SPXQ9BT56 116 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 SPRY4Q9C004 299 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 OCIAD2Q56VL3 154 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 C1orf159Q96HA4 380 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 TP53TG1Q9Y2A0 90 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 BPTFQ12830 3046 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 IGHV1-69DA0A0B4J2H0 117 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 IGHV1-69P01742 117 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
SYNPO-205ENST00000522122 CTSZQ9UBR2 303 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 NDUFS8O00217 210 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 SPRNQ5BIV9 151 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 PRADC1Q9BSG0 188 aa10.93□□□□□ -0.66
SYNPO-205ENST00000522122 C9orf118A6NHY6 69 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 GHRHP01286 108 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 MSMBP08118 114 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 SLC25A16P16260 332 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 DEFB131AP59861 70 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 Q5PR19 223 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 LCNL1Q6ZST4 164 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 VGLL1Q99990 258 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 ANKHD1Q8IWZ3 2542 aaKnown RBP10.92□□□□□ -0.66
SYNPO-205ENST00000522122 SAP30O75446 220 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 DTX2Q86UW9 622 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 C17orf77Q96MU5 243 aa10.92□□□□□ -0.66
SYNPO-205ENST00000522122 DYSFO75923 2080 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 SLC25A20O43772 301 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 INSP01308 110 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 BVES-AS1Q5T3Y7 98 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 MYMXA0A1B0GTQ4 84 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 FAM167A-AS1Q96KT0 104 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 CKS1BP61024 79 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 PIP4P1Q86T03 277 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 NDUFA4O00483 81 aa10.91□□□□□ -0.66
SYNPO-205ENST00000522122 C22orf46C9J442 243 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 ZFAND6Q6FIF0 208 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 KLHL30-AS1Q8NEE0 82 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.66
SYNPO-205ENST00000522122 MRPL35Q9NZE8 188 aaKnown RBP10.9□□□□□ -0.66
SYNPO-205ENST00000522122 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 LINC01356Q8N9X3 169 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 MUC6Q6W4X9 2439 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 TRAV26-2A0A0B4J265 109 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 SDHAF1A6NFY7 115 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 INS-IGF2F8WCM5 200 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 WT1P19544 449 aaPredicted RBP10.9□□□□□ -0.66
SYNPO-205ENST00000522122 PMVKQ15126 192 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 SPINK13Q1W4C9 94 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 IGFL2Q6UWQ7 119 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
SYNPO-205ENST00000522122 FRMD6-AS1P0C7T7 363 aa10.9□□□□□ -0.67
SYNPO-205ENST00000522122 MORN5Q5VZ52 161 aa10.9□□□□□ -0.67
SYNPO-205ENST00000522122 DKK4Q9UBT3 224 aa10.9□□□□□ -0.67
SYNPO-205ENST00000522122 A0A087WX48 190 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 TRAV13-1A0A0B4J241 112 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 PAX4O43316 350 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 NSUN5P1Q3KNT7 163 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 CHD3Q12873 2000 aaKnown RBP10.89□□□□□ -0.67
SYNPO-205ENST00000522122 CRPP02741 224 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 GATA3P23771 443 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 TMEM141Q96I45 108 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 FAM120AOSQ5T036 256 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 PRIMA1Q86XR5 153 aa10.89□□□□□ -0.67
SYNPO-205ENST00000522122 ARHGAP21Q5T5U3 1957 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 C9JAW5 83 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 F8VRH5 84 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 IGKV1OR2-108A0A075B7D4 117 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 RHODO00212 210 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 CCL25O15444 150 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 GP9P14770 177 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 NDUFS7O75251 213 aa10.88□□□□□ -0.67
SYNPO-205ENST00000522122 SP5Q6BEB4 398 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-205ENST00000522122 SHISA9B4DS77 424 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 C1QTNF4Q9BXJ3 329 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 C1orf122Q6ZSJ8 110 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 TP53TG3Q9ULZ0 132 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 PRR14LQ5THK1 2151 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 K7EP13 123 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 EGR2P11161 476 aaPredicted RBP10.87□□□□□ -0.67
SYNPO-205ENST00000522122 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
SYNPO-205ENST00000522122 EXPH5Q8NEV8 1989 aa10.86□□□□□ -0.67
SYNPO-205ENST00000522122 HLA-DRB4P13762 266 aa10.86□□□□□ -0.67
SYNPO-205ENST00000522122 ETDBQ3ZM63 59 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms