RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 CDX1P47902 265 aaPredicted RBP8.15□□□□□ -1.1
MRPS28-208ENST00000521605 Q6AWC8 147 aa8.15□□□□□ -1.1
MRPS28-208ENST00000521605 LCN12Q6JVE5 192 aa8.15□□□□□ -1.1
MRPS28-208ENST00000521605 TM2D3Q9BRN9 247 aa8.15□□□□□ -1.1
MRPS28-208ENST00000521605 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
MRPS28-208ENST00000521605 NAT8BQ9UHF3 227 aa8.15□□□□□ -1.1
MRPS28-208ENST00000521605 SMPXQ9UHP9 88 aa8.15□□□□□ -1.1
MRPS28-208ENST00000521605 IZUMO1RA6ND01 250 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 ZNF705GA8MUZ8 300 aaPredicted RBP8.14□□□□□ -1.11
MRPS28-208ENST00000521605 H3BTX0 84 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 SOCS3O14543 225 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 TRBV12-3P01733 135 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 P01737 135 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 TRGC2P03986 189 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
MRPS28-208ENST00000521605 RPP21Q9H633 154 aaKnown RBP8.14□□□□□ -1.11
MRPS28-208ENST00000521605 DNAH10Q8IVF4 4471 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 IGHV3-35A0A0C4DH35 117 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 M0R3E3 92 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 RPLP1P05386 114 aaKnown RBP8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 CT45A10P0DMU9 189 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
MRPS28-208ENST00000521605 C9orf47Q6ZRZ4 202 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 GBGT1Q8N5D6 347 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 NDFIP1Q9BT67 221 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 NRN1Q9NPD7 142 aa8.13□□□□□ -1.11
MRPS28-208ENST00000521605 TRAV8-2A0A0B4J237 113 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 A0A1B0GW15 77 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 OVOL1O14753 267 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 HLA-DQA1P01909 254 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 APOHP02749 345 aaPredicted RBP8.12□□□□□ -1.11
MRPS28-208ENST00000521605 SNRPCP09234 159 aaKnown RBP8.12□□□□□ -1.11
MRPS28-208ENST00000521605 HOXA5P20719 270 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 RPS20P60866 119 aaKnown RBP8.12□□□□□ -1.11
MRPS28-208ENST00000521605 PRNTQ86SH4 94 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 C4orf3Q8WVX3 66 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 RHPN1-AS1Q9BWJ2 59 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 RPH3ALQ9UNE2 315 aa8.12□□□□□ -1.11
MRPS28-208ENST00000521605 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 TRAV2A0A0B4J234 112 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 TMEM213A2RRL7 107 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 XKRY2A2RUG3 117 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 LY6G6CO95867 125 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 FAM162BQ5T6X4 162 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 RBPMS2Q6ZRY4 209 aaKnown RBP8.11□□□□□ -1.11
MRPS28-208ENST00000521605 FRZBQ92765 325 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 ZC2HC1AQ96GY0 325 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
MRPS28-208ENST00000521605 A0A1B0GXF2 115 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 S100A8P05109 93 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 ZNF138P52744 262 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 KLF5Q13887 457 aaPredicted RBP8.1□□□□□ -1.11
MRPS28-208ENST00000521605 SMUG1Q53HV7 270 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 NHLRC2Q8NBF2 726 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 C16orf92Q96LL3 132 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 NEU1Q99519 415 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 TRAPPC1Q9Y5R8 145 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
MRPS28-208ENST00000521605 IGHV3OR16-8A0A075B7F1 116 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 HIGD1CA8MV81 97 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 SAP30O75446 220 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 IGHV4-30-4P0DP06 118 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 ID1P41134 155 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 INSL3P51460 131 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 SNRPEP62304 92 aaKnown RBP8.09□□□□□ -1.11
MRPS28-208ENST00000521605 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
MRPS28-208ENST00000521605 TMEM78Q5T7P6 136 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 PRR27Q6MZM9 219 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
MRPS28-208ENST00000521605 TMEM136Q6ZRR5 245 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 APRG1Q8IVJ8 170 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 ZFP82Q8N141 532 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 OR11H1Q8NG94 326 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 ODF3Q96PU9 254 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
MRPS28-208ENST00000521605 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
MRPS28-208ENST00000521605 LINC01619G3V211 115 aa8.08□□□□□ -1.12
MRPS28-208ENST00000521605 ZNF207O43670 478 aaKnown RBP8.08□□□□□ -1.12
MRPS28-208ENST00000521605 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
MRPS28-208ENST00000521605 CRIP1P50238 77 aa8.08□□□□□ -1.12
MRPS28-208ENST00000521605 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
MRPS28-208ENST00000521605 FHL3Q13643 280 aa8.08□□□□□ -1.12
MRPS28-208ENST00000521605 TM4SF20Q53R12 229 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms