RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 HOXB5P09067 269 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 Q6ZRG5 221 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 Q8N3U1 123 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 FUNDC2Q9BWH2 189 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 GTSF1LQ9H1H1 148 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 AAMDCQ9H7C9 122 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 NDUFA13Q9P0J0 144 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 ZNF492Q9P255 531 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 TIMM9Q9Y5J7 89 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 TRAV8-1A0A0A6YYK1 113 aa8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 ANKRD20A5PA0PJZ0 165 aa8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 ID3Q02535 119 aa8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 BAK1Q16611 211 aa8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 DAZ4Q86SG3 579 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 DAZ3Q9NR90 486 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-212ENST00000520860 TNXBP22105 4242 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 IGKV2D-24A0A075B6R9 120 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 M0R2P5 195 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 RGS5O15539 181 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 SSSCA1O60232 199 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 NDUFB4O95168 129 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 PDE6HQ13956 83 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 RHOHQ15669 191 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 VWC2Q2TAL6 325 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 FAM159AQ6UWV7 190 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 TMEM14EPQ6UXP3 125 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 C12orf45Q8N5I9 185 aaPredicted RBP8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 SLC25A29Q8N8R3 303 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 HSD17B11Q8NBQ5 300 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 OR1L4Q8NGR5 311 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 SMIM8Q96KF7 97 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 MGST2Q99735 147 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 SOSTQ9BQB4 213 aa8.5□□□□□ -1.05
SRGAP3-212ENST00000520860 TRBV7-9A0A0J9YWB2 115 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 CTDSPLO15194 276 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 NOL3O60936 208 aaKnown RBP8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 ZNF138P52744 262 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 UBE2MP61081 183 aaKnown RBP8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 RAB31Q13636 194 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 C14orf177Q52M58 125 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 Q8TAT8 98 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 MIXL1Q9H2W2 232 aa8.49□□□□□ -1.05
SRGAP3-212ENST00000520860 A0A0D9SG52 128 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 SFT2D2O95562 160 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 SMIM18P0DKX4 95 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 CAMLGP49069 296 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 IL18Q14116 193 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 ZNF266Q14584 549 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 FFAR4Q5NUL3 377 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 PFDN5Q99471 154 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 GGACTQ9BVM4 153 aa8.48□□□□□ -1.05
SRGAP3-212ENST00000520860 OR10J4P0C629 311 aa8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 SEC11BP0C7V7 166 aa8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 MIC13Q5XKP0 118 aa8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 OR51M1Q9H341 326 aa8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 GPN1Q9HCN4 374 aaPredicted RBP8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 TMEM14CQ9P0S9 112 aa8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 RABL2AQ9UBK7 228 aaPredicted RBP8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 NAGKQ9UJ70 344 aa8.47□□□□□ -1.05
SRGAP3-212ENST00000520860 C5orf51A6NDU8 294 aa8.46□□□□□ -1.06
SRGAP3-212ENST00000520860 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
SRGAP3-212ENST00000520860 ATP5SQ99766 215 aa8.46□□□□□ -1.06
SRGAP3-212ENST00000520860 SLC39A9Q9NUM3 307 aa8.46□□□□□ -1.06
SRGAP3-212ENST00000520860 URGCP-MRPS24S4R325 110 aa8.46□□□□□ -1.06
SRGAP3-212ENST00000520860 CIDEAO60543 219 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 TSC22D2O75157 780 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 PYYP10082 97 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 FAUP35544 74 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 ARL16Q0P5N6 197 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 Q6AWC8 147 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 NRARPQ7Z6K4 114 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 DIRAS2Q96HU8 199 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 C2orf50Q96LR7 162 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 BCL7BQ9BQE9 202 aa8.45□□□□□ -1.06
SRGAP3-212ENST00000520860 CCDC160A6NGH7 325 aa8.44□□□□□ -1.06
SRGAP3-212ENST00000520860 CTDSP2O14595 271 aa8.44□□□□□ -1.06
SRGAP3-212ENST00000520860 SCGB1D2O95969 90 aa8.44□□□□□ -1.06
SRGAP3-212ENST00000520860 TAS2R30P59541 319 aa8.44□□□□□ -1.06
SRGAP3-212ENST00000520860 DYNC2LI1Q8TCX1 351 aa8.44□□□□□ -1.06
SRGAP3-212ENST00000520860 A0A087WWC5 75 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 GNRH2O43555 120 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 TMBIM6P55061 237 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 ODF1Q14990 250 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 MCFD2Q8NI22 146 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-212ENST00000520860 KRTAP9-6A0A140TA67 174 aa8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 MGST1P10620 155 aaKnown RBP8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 CSN1S1P47710 185 aa8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 ZNF876PQ49A33 203 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms