RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 FAM74A3Q4VXF1 159 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 Q6ZWC4 215 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 TMEM183AQ8IXX5 376 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 TMEM256Q8N2U0 113 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 ZFAND2AQ8N6M9 145 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 NIPSNAP3BQ9BS92 247 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
SDC2-203ENST00000519587 DNAH3Q8TD57 4116 aa10.34□□□□□ -0.75
SDC2-203ENST00000519587 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
SDC2-203ENST00000519587 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
SDC2-203ENST00000519587 SRSF3P84103 164 aaKnown RBP10.34□□□□□ -0.75
SDC2-203ENST00000519587 SOHLH1Q5JUK2 328 aa10.34□□□□□ -0.75
SDC2-203ENST00000519587 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
SDC2-203ENST00000519587 EIF4E3Q8N5X7 224 aaKnown RBP10.34□□□□□ -0.75
SDC2-203ENST00000519587 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
SDC2-203ENST00000519587 TMEM208Q9BTX3 173 aa10.34□□□□□ -0.75
SDC2-203ENST00000519587 TRAV12-2A0A075B6T6 113 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 GCGP01275 180 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 SFTA3P0C7M3 94 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 ASCL2Q99929 193 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 B9D2Q9BPU9 175 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 TP53TG1Q9Y2A0 90 aa10.33□□□□□ -0.76
SDC2-203ENST00000519587 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 C9JQL5 133 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 H7BYZ3 331 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
SDC2-203ENST00000519587 MGST1P10620 155 aaKnown RBP10.32□□□□□ -0.76
SDC2-203ENST00000519587 BTN1A1Q13410 526 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 NDUFA5Q16718 116 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 FAM162BQ5T6X4 162 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 Q6AWC8 147 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 COX8CQ7Z4L0 72 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 SPATA25Q9BR10 227 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 LY96Q9Y6Y9 160 aa10.32□□□□□ -0.76
SDC2-203ENST00000519587 CRXO43186 299 aaPredicted RBP10.31□□□□□ -0.76
SDC2-203ENST00000519587 PFN1P07737 140 aaKnown RBP10.31□□□□□ -0.76
SDC2-203ENST00000519587 PRR9Q5T870 116 aa10.31□□□□□ -0.76
SDC2-203ENST00000519587 NHLRC2Q8NBF2 726 aa10.31□□□□□ -0.76
SDC2-203ENST00000519587 ZC2HC1AQ96GY0 325 aa10.31□□□□□ -0.76
SDC2-203ENST00000519587 ZMAT4Q9H898 229 aa10.31□□□□□ -0.76
SDC2-203ENST00000519587 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 SPRY2O43597 315 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 CSNK1G2-AS1Q8NCQ2 148 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 RNF183Q96D59 192 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 LINC01587Q99440 93 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 PYGO2Q9BRQ0 406 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 NAT8Q9UHE5 227 aa10.3□□□□□ -0.76
SDC2-203ENST00000519587 FABP5P3A8MUU1 101 aa10.29□□□□□ -0.76
SDC2-203ENST00000519587 KIR3DS1Q14943 382 aa10.29□□□□□ -0.76
SDC2-203ENST00000519587 TMEM241Q24JQ0 296 aa10.29□□□□□ -0.76
SDC2-203ENST00000519587 PRR27Q6MZM9 219 aa10.29□□□□□ -0.76
SDC2-203ENST00000519587 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
SDC2-203ENST00000519587 TM2D3Q9BRN9 247 aa10.29□□□□□ -0.76
SDC2-203ENST00000519587 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
SDC2-203ENST00000519587 FAM159AQ6UWV7 190 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 ZNF705AQ6ZN79 300 aaPredicted RBP10.28□□□□□ -0.76
SDC2-203ENST00000519587 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 OR11H2Q8NH07 326 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 DAZAP1Q96EP5 407 aaKnown RBP10.28□□□□□ -0.76
SDC2-203ENST00000519587 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
SDC2-203ENST00000519587 IGHV1OR15-1A0A075B7D0 117 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 TMEM218A2RU14 115 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 SH2D1AO60880 128 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
SDC2-203ENST00000519587 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
SDC2-203ENST00000519587 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
SDC2-203ENST00000519587 RRN3P1Q2M238 152 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 NEU1Q99519 415 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
SDC2-203ENST00000519587 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 F8W036 122 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 MIFP14174 115 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
SDC2-203ENST00000519587 PNRC1Q12796 327 aaPredicted RBP10.26□□□□□ -0.77
SDC2-203ENST00000519587 ADIRFQ15847 76 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 OCC1Q8TAD7 63 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 OVOL2Q9BRP0 275 aa10.26□□□□□ -0.77
SDC2-203ENST00000519587 CBY3A6NI87 242 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 P01737 135 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 ORM1P02763 201 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 HTN1P15515 57 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 TDRG1Q3Y452 100 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
SDC2-203ENST00000519587 SEC11CQ9BY50 192 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms