RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PF4P02776 101 aa10.9□□□□□ -0.66
CLN8-204ENST00000519254 COA6Q5JTJ3 125 aaKnown RBP10.9□□□□□ -0.66
CLN8-204ENST00000519254 GDF5OSQ5U4N7 250 aa10.9□□□□□ -0.66
CLN8-204ENST00000519254 RASL11AQ6T310 242 aa10.9□□□□□ -0.66
CLN8-204ENST00000519254 C9orf47Q6ZRZ4 202 aa10.9□□□□□ -0.66
CLN8-204ENST00000519254 TMEM158Q8WZ71 300 aa10.9□□□□□ -0.66
CLN8-204ENST00000519254 PGLYRP4Q96LB8 373 aa10.9□□□□□ -0.66
CLN8-204ENST00000519254 IGKV3-7A0A075B6H7 116 aa10.9□□□□□ -0.67
CLN8-204ENST00000519254 MT-ND6P03923 174 aa10.9□□□□□ -0.67
CLN8-204ENST00000519254 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.67
CLN8-204ENST00000519254 RBPMS2Q6ZRY4 209 aaKnown RBP10.9□□□□□ -0.67
CLN8-204ENST00000519254 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.67
CLN8-204ENST00000519254 M0QZ24 198 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 OVOL1O14753 267 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 BMI1P35226 326 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 ZNF138P52744 262 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 RAB4BP61018 213 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 ATP5L2Q7Z4Y8 100 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 C3orf56Q8N813 242 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 ZNF738Q8NE65 137 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 NDFIP1Q9BT67 221 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 PPP1R14DQ9NXH3 145 aa10.89□□□□□ -0.67
CLN8-204ENST00000519254 HLA-DQA1P01909 254 aa10.88□□□□□ -0.67
CLN8-204ENST00000519254 ZNF705DP0CH99 300 aaPredicted RBP10.88□□□□□ -0.67
CLN8-204ENST00000519254 ZNF705BP0CI00 300 aaPredicted RBP10.88□□□□□ -0.67
CLN8-204ENST00000519254 TMEM78Q5T7P6 136 aa10.88□□□□□ -0.67
CLN8-204ENST00000519254 C12orf54Q6X4T0 127 aa10.88□□□□□ -0.67
CLN8-204ENST00000519254 ADAMTSL5Q6ZMM2 481 aa10.88□□□□□ -0.67
CLN8-204ENST00000519254 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
CLN8-204ENST00000519254 DCANP1Q8TF63 244 aa10.88□□□□□ -0.67
CLN8-204ENST00000519254 ATRQ13535 2644 aa10.87□□□□□ -0.67
CLN8-204ENST00000519254 TMEM189A5PLL7 270 aa10.87□□□□□ -0.67
CLN8-204ENST00000519254 CSN3P07498 182 aa10.87□□□□□ -0.67
CLN8-204ENST00000519254 DEFB1P60022 68 aa10.87□□□□□ -0.67
CLN8-204ENST00000519254 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
CLN8-204ENST00000519254 DYNLRB2Q8TF09 96 aa10.87□□□□□ -0.67
CLN8-204ENST00000519254 FABP5P3A8MUU1 101 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 CAMPP49913 170 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 HBBP68871 147 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 SLAQ13239 276 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 LINC00518Q8N0U6 118 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 ZNF747Q9BV97 191 aa10.86□□□□□ -0.67
CLN8-204ENST00000519254 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
CLN8-204ENST00000519254 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 APCSP02743 223 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 LINC00477Q96M19 166 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 MS4A6AQ9H2W1 248 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 WNK1Q9H4A3 2382 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 S100A8P05109 93 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 TFPI2P48307 235 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 WFDC3Q8IUB2 231 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 LURAP1LQ8IV03 231 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 SSBP4Q9BWG4 385 aaPredicted RBP10.85□□□□□ -0.67
CLN8-204ENST00000519254 TP53TG3Q9ULZ0 132 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 SORL1Q92673 2214 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 TENM1Q9UKZ4 2725 aa10.85□□□□□ -0.67
CLN8-204ENST00000519254 F6UB75 175 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 SAP30O75446 220 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 ARMS2P0C7Q2 107 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 CRISP2P16562 243 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 SAMD13Q5VXD3 122 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 LINC00482Q8N8I6 264 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 OR8A1Q8NGG7 326 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
CLN8-204ENST00000519254 A0A1B0GUT8 65 aa10.83□□□□□ -0.68
CLN8-204ENST00000519254 ID1P41134 155 aa10.83□□□□□ -0.68
CLN8-204ENST00000519254 PRR31Q5SQ13 230 aa10.83□□□□□ -0.68
CLN8-204ENST00000519254 Q6AWC8 147 aa10.83□□□□□ -0.68
CLN8-204ENST00000519254 HIST1H2BLQ99880 126 aa10.83□□□□□ -0.68
CLN8-204ENST00000519254 K7EQG2 157 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 NUPR1O60356 82 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 ORM1P02763 201 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
CLN8-204ENST00000519254 HIST1H1AQ02539 215 aaPredicted RBP10.82□□□□□ -0.68
CLN8-204ENST00000519254 Q0VG73 95 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 PRR9Q5T870 116 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 FAM19A4Q96LR4 140 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 F2Z2F3 143 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 FABP4P15090 132 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 S100A2P29034 98 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 SRIP30626 198 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 LINC00310P59036 64 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 SHISA2Q6UWI4 295 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 Q6ZQT7 251 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 TMEM61Q8N0U2 210 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 ZFAND2AQ8N6M9 145 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 SPATA3Q8NHX4 192 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
CLN8-204ENST00000519254 IGKV3D-20A0A0C4DH25 116 aa10.81□□□□□ -0.68
CLN8-204ENST00000519254 AMBPP02760 352 aa10.81□□□□□ -0.68
CLN8-204ENST00000519254 IGLC6P0CF74 106 aa10.81□□□□□ -0.68
CLN8-204ENST00000519254 RIGQ13278 110 aa10.81□□□□□ -0.68
CLN8-204ENST00000519254 DEFB114Q30KQ6 69 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms